RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 C3orf18Q9UK00 162 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 E7ENX8 843 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 AP2S1P53680 142 aaPredicted RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 VBP1P61758 197 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ADGRG2Q8IZP9 1017 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 CDADC1Q9BWV3 514 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ERVK-5Q9HDB9 667 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 INTS7Q9NVH2 962 aaKnown RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 UQCRBP14927 111 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 GABRB2P47870 512 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 MC1RQ01726 317 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 MEA1Q16626 185 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 PTPRNQ16849 979 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 INTS11Q5TA45 600 aaKnown RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 CWF19L1Q69YN2 538 aaKnown RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF285Q96NJ3 590 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 KLHL5Q96PQ7 755 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 MRPL57Q9BQC6 102 aaKnown RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 FBXL21Q9UKT6 434 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 IQCF5A8MTL0 148 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 ULK1O75385 1050 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 RPL7AP62424 266 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 PPIL2Q13356 520 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 REP15Q6BDI9 236 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 SATL1Q86VE3 508 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF433Q8N7K0 673 aaPredicted RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 WNT8BQ93098 351 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 AARSD1Q9BTE6 412 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 KIAA1324Q6UXG2 1013 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 DEPDC4Q8N2C3 294 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 MAPRE3Q9UPY8 281 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 TBC1D3BA6NDS4 549 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 H3BM21 787 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 EIF4BP23588 611 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 SIM2Q14190 667 aaPredicted RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 TTC23Q5W5X9 447 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 OGFOD2Q6N063 350 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 HMBOX1Q6NT76 420 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 C7orf57Q8NEG2 295 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 C1GALT1C1Q96EU7 318 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 CNPPD1Q9BV87 410 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 MALT1Q9UDY8 824 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 CD84Q9UIB8 345 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 RAP2CQ9Y3L5 183 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 KCNU1A8MYU2 1149 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 PRODHO43272 600 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 AZGP1P25311 298 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 TLX1P31314 330 aaPredicted RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 FAM129CQ86XR2 697 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 RGL4Q8IZJ4 473 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 GAL3ST1Q99999 423 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 MRPL45Q9BRJ2 306 aaKnown RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 A0A0X1KG70 313 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 H7C0S8 307 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 TCF4P15884 667 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 ITGA2P17301 1181 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 PSEN2P49810 448 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
SSRP1-202ENST00000293880 CLEC6AQ6EIG7 209 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 STK40Q8N2I9 435 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 MAGEC3Q8TD91 643 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 AP3S1Q92572 193 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 VCPIP1Q96JH7 1222 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 SEMA3CQ99985 751 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 CORO1BQ9BR76 489 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 TMEM39AQ9NV64 488 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 MAP4K5Q9Y4K4 846 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
SSRP1-202ENST00000293880 SUV39H1O43463 412 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ATP13A5Q4VNC0 1218 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 MPPE1Q53F39 396 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 MCFD2Q8NI22 146 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 TSEN15Q8WW01 171 aaKnown RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 RERGQ96A58 199 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 TTYH1Q9H313 450 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SGK2Q9HBY8 427 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 PCYOX1Q9UHG3 505 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF490Q9ULM2 529 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 NCANO14594 1321 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 NFASCO94856 1347 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SCAMP1O15126 338 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SMU1Q2TAY7 513 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 LDB1Q86U70 411 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 NKAPQ8N5F7 415 aaKnown RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SLC9A6Q92581 669 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ADAM2Q99965 735 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 IKZF4Q9H2S9 585 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 GGA2Q9UJY4 613 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SYNPO2Q9UMS6 1093 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ARHGEF33A8MVX0 844 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SLC22A3O75751 556 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 UGT2B17O75795 530 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms