RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ARL8BQ9NVJ2 186 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 LOXHD1Q8IVV2 1947 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 BTN3A1O00481 513 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZMPSTE24O75844 475 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 LYNP07948 512 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PCNAP12004 261 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 GRIA4P48058 902 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 MARCKSL1P49006 195 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLCN5P51795 746 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 CASP5P51878 434 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 IRF2BP2Q7Z5L9 587 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 KAT5Q92993 513 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ARMC7Q9H6L4 198 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 MGRN1O60291 552 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 TSPAN9O75954 239 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SCNN1BP51168 640 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 TGM3Q08188 693 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZIK1Q3SY52 487 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 YAF2Q8IY57 180 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 DEFB106AQ8N104 65 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PROX1Q92786 737 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 EZH1Q92800 747 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 TBCDQ9BTW9 1192 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 HERC2P3Q9BVR0 1158 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PLA2G4CQ9UP65 541 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 STON1Q9Y6Q2 735 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC12A8A0AV02 714 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 OR6C75A6NL08 312 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PRR5-ARHGAP8B1AHC4 643 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PROZP22891 400 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC26A3P40879 764 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 GPR15P49685 360 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ARHGAP8P85298 464 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC10A6Q3KNW5 377 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 IL27RAQ6UWB1 636 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF621Q6ZSS3 439 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 OOSP2Q86WS3 158 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 SYT15Q9BQS2 421 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 PTPRHQ9HD43 1115 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 OPTCQ9UBM4 332 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
SYNGAP1-201ENST00000293748 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 DBTP11182 482 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TNFSF9P41273 254 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ACSM2AQ08AH3 577 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ADIGQ0VDE8 80 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 EFEMP1Q12805 493 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 PRKG2Q13237 762 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZSWIM7Q19AV6 140 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 LIPMQ5VYY2 423 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ACSM2BQ68CK6 577 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 MACC1Q6ZN28 852 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ATG14Q6ZNE5 492 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ARHGAP36Q6ZRI8 547 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 NKAPQ8N5F7 415 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF540Q8NDQ6 660 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 MCOLN3Q8TDD5 553 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RIPOR3Q96MK2 946 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 Q96MT0 163 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 MRPL57Q9BQC6 102 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 COG5Q9UP83 839 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 GJB6O95452 261 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TGDSO95455 350 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RAB25P57735 213 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 PPM1LQ5SGD2 360 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RNF220Q5VTB9 566 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TAS1R3Q7RTX0 852 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ALYREFQ86V81 257 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 FAM47BQ8NA70 645 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 UXS1Q8NBZ7 420 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF689Q96CS4 500 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 BTBD9Q96Q07 612 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RAB26Q9ULW5 256 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 hCG_1818297A0A087WSY0 165 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 MATN2O00339 956 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 NADKO95544 446 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 MLYCDO95822 493 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF143P52747 638 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 IL2P60568 153 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms