RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PLCL1Q15111 1095 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 RASA2Q15283 850 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 IMPG1Q17R60 797 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 SYTL3Q4VX76 610 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ALS2CLQ60I27 953 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 USP45Q70EL2 814 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 HDXQ7Z353 690 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PYROXD1Q8WU10 500 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 NSMCE3Q96MG7 304 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TMEM109Q9BVC6 243 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 CDC42EP4Q9H3Q1 356 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ZDHHC6Q9H6R6 413 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PRSS16Q9NQE7 514 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 SYBUQ9NX95 663 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 EVLQ9UI08 416 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 SLCO3A1Q9UIG8 710 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 H0Y858 1186 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 CFLARO15519 480 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ATG13O75143 517 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PMPCBO75439 489 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 OCM2P0CE71 109 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 OCMP0CE72 109 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PAMP19021 973 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 MSH2P43246 934 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 RPS9P46781 194 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 MESP2Q0VG99 397 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 DDX39BQ13838 428 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 QPCTQ16769 361 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PKN3Q6P5Z2 889 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TXNDC11Q6PKC3 985 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 DPPA4Q7L190 304 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TMEM135Q86UB9 458 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 OOSP2Q86WS3 158 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ZBED8Q8IZ13 594 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 FBXO36Q8NEA4 188 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 NR1H4Q96RI1 486 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 WDR83Q9BRX9 315 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TRIM54Q9BYV2 358 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TREX1Q9NSU2 369 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 NSMCE4AQ9NXX6 385 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ANKRD66B4E2M5 251 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 AP1G1O43747 822 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 SIN3BO75182 1162 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 POLBP06746 335 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 CTSLP07711 333 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PBLDP30039 288 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 MSS51Q4VC12 460 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 MAMSTRQ6ZN01 415 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 GPATCH11Q8N954 259 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PPWD1Q96BP3 646 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 KCTD5Q9NXV2 234 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 MMP17Q9ULZ9 603 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PIGNO95427 931 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 MGAT1P26572 445 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ELP6Q0PNE2 266 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF776Q68DI1 518 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 KIAA0930Q6ICG6 404 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CABS1Q96KC9 395 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CDH19Q9H159 772 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 NLE1Q9NVX2 485 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 SUFUQ9UMX1 484 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 KANSL1LA0AUZ9 987 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 A8MX80 341 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 UPK3BL1B0FP48 263 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 UPK3BL2E5RIL1 263 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 GNGT2O14610 69 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 GJB3O75712 270 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 C5AR1P21730 350 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ELK3P41970 407 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF140P52738 457 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 SPARCL1Q14515 664 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TMED2Q15363 201 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 KLHL38Q2WGJ6 581 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 NAIF1Q69YI7 327 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CBARPQ8N350 705 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 IL17RCQ8NAC3 791 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 LPCAT1Q8NF37 534 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 SORCS1Q8WY21 1168 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 OTULINQ96BN8 352 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 EXOC2Q96KP1 924 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TM6SF2Q9BZW4 377 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ABCG4Q9H172 646 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 LTB4R2Q9NPC1 389 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 UBP1Q9NZI7 540 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 NDOR1Q9UHB4 597 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ARID1BQ8NFD5 2236 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 LEFTY1O75610 366 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 MT-ND3P03897 115 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TROVE2P10155 538 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 HSD17B3P37058 310 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 COPAP53621 1224 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 STAT4Q14765 748 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CDKN3Q16667 212 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TMEM52BQ4KMG9 183 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms