RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 WFIKKN2Q8TEU8 576 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 SUSD3Q96L08 255 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 RPS6KA6Q9UK32 745 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PEX1O43933 1283 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 F2P00734 622 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PIGRP01833 764 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 ZCCHC18P0CG32 403 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 MYBL2P10244 700 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 SRFBP1Q8NEF9 429 aaKnown RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 HMCESQ96FZ2 354 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 SLC24A3Q9HC58 644 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 CHRAC1Q9NRG0 131 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 FAM20BO75063 409 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 FSBPO95073 299 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 ASLP04424 464 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 MYL12AP19105 171 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PSMB9P28065 219 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 HNRNPH1P31943 449 aaKnown RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 TALDO1P37837 337 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PURAQ00577 322 aaKnown RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 EXOC3L1Q86VI1 746 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PYROXD2Q8N2H3 581 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 ANKRD49Q8WVL7 239 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 TEKT5Q96M29 485 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 MYLK2Q9H1R3 596 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 DPEP2Q9H4A9 486 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 RIBC2Q9H4K1 309 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 DNAJC11Q9NVH1 559 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 CORO2BQ9UQ03 480 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 FCF1Q9Y324 198 aaKnown RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 COLEC10Q9Y6Z7 277 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 PTP4A2Q12974 167 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 HECTD2Q5U5R9 776 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 DHRSXQ8N5I4 330 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 DNAJB14Q8TBM8 379 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 MTERF3Q96E29 417 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 AARSD1Q9BTE6 412 aaKnown RBP18.51■□□□□ 0.55
PCDH1-201ENST00000287008 CAB39LQ9H9S4 337 aa18.51■□□□□ 0.55
PCDH1-201ENST00000287008 STK16O75716 305 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 CCND3P30281 292 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-201ENST00000287008 SP2Q02086 613 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 FAAH2Q6GMR7 532 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF549Q6P9A3 640 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 TRIM40Q6P9F5 258 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 KIAA0408Q6ZU52 694 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 SPATA22Q8NHS9 363 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 ZSCAN18Q8TBC5 510 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-201ENST00000287008 PSMG2Q969U7 264 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 KLHL3Q9UH77 587 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 GPN3Q9UHW5 284 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-201ENST00000287008 SLIT2O94813 1529 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 ITPKAP23677 461 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 CCR3P51677 355 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 SEMA5AQ13591 1074 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 NELL1Q92832 810 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 ACDQ96AP0 544 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 SLC9A8Q9Y2E8 581 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 MTF2Q9Y483 593 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-201ENST00000287008 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 TMPRSS11BQ86T26 416 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 AADATQ8N5Z0 425 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 CENPTQ96BT3 561 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 C1orf50Q9BV19 199 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 N6AMT1Q9Y5N5 214 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 OR2AG2A6NM03 316 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 H3BNH8 94 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 COL6A2P12110 1019 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 HK2P52789 917 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 TEAD4Q15561 434 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 PLA2G4EQ3MJ16 856 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 DLG3Q92796 817 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 PPCDCQ96CD2 204 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 MARK4Q96L34 752 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 B3GALT6Q96L58 329 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 ABCB8Q9NUT2 735 aa18.5■□□□□ 0.55
PCDH1-201ENST00000287008 GTPBP1O00178 669 aaKnown RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 IRAK2O43187 625 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 NAE1Q13564 534 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 INO80DQ53TQ3 878 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 CDC73Q6P1J9 531 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF276Q8N554 614 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 KLHL32Q96NJ5 620 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 BTBD9Q96Q07 612 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 C3orf14Q9HBI5 128 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ELOVL2Q9NXB9 296 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 WRAP73Q9P2S5 460 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 TPRKBQ9Y3C4 175 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 RFXANKO14593 260 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 SNX3O60493 162 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 CLPTM1O96005 669 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 SEC13P55735 322 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ATP13A5Q4VNC0 1218 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 TMEM192Q8IY95 271 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 GPR21Q99679 349 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 TMEM175Q9BSA9 504 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms