RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MYOCOSA0A1B0GUC4 107 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 C2orf78A6NCI8 922 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TRIM43BA6NCK2 446 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 STX16-NPEPL1H3BU86 382 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 ANXA9O76027 345 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 CSPG5O95196 566 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 SOD2P04179 222 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 C8BP07358 591 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 IRF1P10914 325 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 COL6A2P12110 1019 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PCSK6P29122 969 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 ADRA1AP35348 466 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 CD86P42081 329 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 NDST2P52849 883 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 NAGLUP54802 743 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 RPS24P62847 133 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 POLD3Q15054 466 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 AMIGO2Q86SJ2 522 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PGBD5Q8N414 524 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 MIPOL1Q8TD10 442 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TRIM43Q96BQ3 446 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 A0A0J9YVX5 310 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 DRGXA6NNA5 263 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 H3BSA7 217 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 RAMP2O60895 175 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 KLKB1P03952 638 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 CCR10P46092 362 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 TUFMP49411 452 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 SGSHP51688 502 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 BTG3Q14201 252 aaPredicted RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 ESRP1Q6NXG1 681 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 LINC00523Q86TU6 105 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 LSMEM2Q8N112 164 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 TMA16Q96EY4 203 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 DNAAF2Q9NVR5 837 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 RSL24D1Q9UHA3 163 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 AFF4Q9UHB7 1163 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 DNMT3LQ9UJW3 386 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 TRPC5OSA6NMA1 111 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 WNT3AP56704 352 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 RING1Q06587 406 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 GRM3Q14832 879 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 MARC1Q5VT66 337 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 IL23RQ5VWK5 629 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 PAOXQ6QHF9 649 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 SLC39A11Q8N1S5 342 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 TTC16Q8NEE8 873 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 MAELQ96JY0 434 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 SCYL1Q96KG9 808 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 RHOJQ9H4E5 214 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 AP4S1Q9Y587 144 aa18.33■□□□□ 0.52
PDLIM3-201ENST00000284767 ABLIM3O94929 683 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 GEMP55040 296 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 SLC12A1Q13621 1099 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 TRIM25Q14258 630 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 ERI1Q8IV48 349 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 TRPC4APQ8TEL6 797 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 PPP1R14BQ96C90 147 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 MOCOSQ96EN8 888 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 ZNF558Q96NG5 402 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 NPAS2Q99743 824 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 CCT7Q99832 543 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 KIFC1Q9BW19 673 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 SMPD4Q9NXE4 827 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 ZFP37Q9Y6Q3 630 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 TARM1B6A8C7 271 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 MUSKO15146 869 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 H6PDO95479 791 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 MMP2P08253 660 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 ALDH3B2P48448 385 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 CDK9P50750 372 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 SULT2A1Q06520 285 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 SEPT6Q14141 434 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 RANBP10Q6VN20 620 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 OTOP2Q7RTS6 562 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 ZC3HC1Q86WB0 502 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 DENND6AQ8IWF6 608 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 TRIML2Q8N7C3 387 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 CYP2S1Q96SQ9 504 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 RC3H2Q9HBD1 1191 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 HACD3Q9P035 362 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 RNF11Q9Y3C5 154 aa18.32■□□□□ 0.52
PDLIM3-201ENST00000284767 F5H5T6 163 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 JUNP05412 331 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 SAT1P21673 171 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 RENBPP51606 427 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 ATXN3P54252 364 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 EMP3P54852 163 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 ADARP55265 1226 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 PSME3P61289 254 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 WDR5P61964 334 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 HECTD3Q5T447 861 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 PKN3Q6P5Z2 889 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 KDELC1Q6UW63 502 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 CARM1Q86X55 608 aa18.31■□□□□ 0.52
PDLIM3-201ENST00000284767 OR7D4Q8NG98 312 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms