RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 HS3ST3A1Q9Y663 406 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 ARHGEF17Q96PE2 2063 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TTC24A2A3L6 582 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 PRR19A6NJB7 356 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MYO1FO00160 1098 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TRAFD1O14545 582 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 AQP9O43315 295 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MFSD11O43934 449 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MAFKO60675 156 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MMP20O60882 483 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 PALMO75781 387 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 PROSCO94903 275 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MMP12P39900 470 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ARL4AP40617 200 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 RAD51Q06609 339 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 RALGDSQ12967 914 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 DPYSL3Q14195 570 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 LZTR1Q8N653 840 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 HCAR2Q8TDS4 363 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 USP7Q93009 1102 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 CENPTQ96BT3 561 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ABHD17AQ96GS6 310 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ZNF599Q96NL3 588 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 CATSPER2Q96P56 530 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 WRAP53Q9BUR4 548 aaKnown RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 PCDH12Q9NPG4 1184 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 RCOR3Q9P2K3 495 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-201ENST00000276585 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
MRPS28-201ENST00000276585 FBN3Q75N90 2809 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 D6RAR5 112 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CLDN1O95832 211 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 TMEM253P0C7T8 217 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 GM2AP17900 193 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CD82P27701 267 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CDH6P55285 790 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 EIF2B5Q13144 721 aaKnown RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 IHHQ14623 411 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 UGP2Q16851 508 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 NCBP2-AS2Q69YL0 99 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 SLC35F3Q8IY50 421 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 GALNT11Q8NCW6 608 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 PCDH19Q8TAB3 1148 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 FAF2Q96CS3 445 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 TMEM74Q96NL1 305 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CINPQ9BW66 212 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 CTTNBP2NLQ9P2B4 639 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 COQ6Q9Y2Z9 468 aa12.33□□□□□ -0.44
MRPS28-201ENST00000276585 SCN8AQ9UQD0 1980 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 PCNX1Q96RV3 2341 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 NEMP1O14524 444 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 MTA2O94776 668 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 CSF2P04141 144 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 H2AFZP0C0S5 128 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 MAN1A1P33908 653 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 GJC1P36383 396 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 ETV5P41161 510 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 RABIFP47224 123 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 SUOXP51687 545 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 NSUN2Q08J23 767 aaKnown RBP eCLIP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 NAA30Q147X3 362 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 GRM3Q14832 879 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 PAFAH1B3Q15102 231 aaKnown RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 AGERQ15109 404 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 IRF4Q15306 451 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 BRAT1Q6PJG6 821 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 H2AFVQ71UI9 128 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 PQLC3Q8N755 202 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 MGME1Q9BQP7 344 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
MRPS28-201ENST00000276585 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-201ENST00000276585 PADI4Q9UM07 663 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms