RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 KYQ8NBH2 561 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 OR56A4Q8NGH8 313 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 MAPK15Q8TD08 544 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 ZNF830Q96NB3 372 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 MAK16Q9BXY0 300 aaKnown RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 WDR26Q9H7D7 661 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 RABGEF1Q9UJ41 708 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 AK5Q9Y6K8 562 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 DGKBQ9Y6T7 804 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 PMS2P1A4D2B8 440 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 PSMD11O00231 422 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 CACNB4O00305 520 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 CSO75390 466 aaKnown RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 SOD1P00441 154 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 FUCA1P04066 466 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 ANXA6P08133 673 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 ZFXP17010 805 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 ITPKBP27987 946 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 CD86P42081 329 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 BLKP51451 505 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 DUSP3P51452 185 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 ARHGEF7Q14155 803 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 PDK1Q15118 436 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 ELOCQ15369 112 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 NR0B2Q15466 257 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 SPA17Q15506 151 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 C11orf63Q6NUN7 778 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 SPOCD1Q6ZMY3 1216 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 HEATR4Q86WZ0 1026 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 TMTC1Q8IUR5 882 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 FSTL5Q8N475 847 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 KRT35Q92764 455 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 DCBLD2Q96PD2 775 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN3-201ENST00000275036 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 CD84Q9UIB8 345 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 DUSP10Q9Y6W6 482 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
HMGN3-201ENST00000275036 hCG_1818297A0A087WSY0 165 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 CST8O60676 142 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 TNFP01375 233 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 MPOP05164 745 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 MYCLP1P12525 358 aaPredicted RBP14.4□□□□□ -0.1
HMGN3-201ENST00000275036 CTSEP14091 401 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 NFKBIAP25963 317 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 EIF2S3P41091 472 aaKnown RBP14.4□□□□□ -0.1
HMGN3-201ENST00000275036 EPHB1P54762 984 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 ODF2Q5BJF6 829 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 KAZNQ674X7 775 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 PDZD3Q86UT5 571 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 ACRBPQ8NEB7 543 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 LPCAT1Q8NF37 534 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 ATL2Q8NHH9 583 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 CCL4L1Q8NHW4 92 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 SCAMP4Q969E2 229 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 AGAP2Q99490 1192 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 ABCG8Q9H221 673 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 SIRPGQ9P1W8 387 aa14.4□□□□□ -0.1
HMGN3-201ENST00000275036 PRSS38A1L453 326 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 TNFRSF10CO14798 259 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-201ENST00000275036 USP12O75317 370 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 CLDN7O95471 211 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 CEACAM5P06731 702 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 ZNF30P17039 623 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 STC1P52823 247 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 CDK3Q00526 305 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 DPTQ07507 201 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-201ENST00000275036 QPCTQ16769 361 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 ISXQ2M1V0 245 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 RAET1GQ6H3X3 334 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 DAAM2Q86T65 1068 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 NDUFAF2Q8N183 169 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 ARL10Q8N8L6 244 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 SNIP1Q8TAD8 396 aaKnown RBP14.39□□□□□ -0.11
HMGN3-201ENST00000275036 TADA1Q96BN2 335 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
HMGN3-201ENST00000275036 AGAP3Q96P47 875 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 DEPDC7Q96QD5 511 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 TRIB3Q96RU7 358 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 HERPUD2Q9BSE4 406 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-201ENST00000275036 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 TMEM168Q9H0V1 697 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 HAUS2Q9NVX0 235 aa14.39□□□□□ -0.11
HMGN3-201ENST00000275036 KCTD5Q9NXV2 234 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms