RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 HERC2P3Q9BVR0 1158 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 DUSP16Q9BY84 665 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SEMA4BQ9NPR2 832 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 TRHDEQ9UKU6 1024 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SARDHQ9UL12 918 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ALBP02768 609 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 INHBBP09529 407 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 HOXA11P31270 313 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 OPRL1P41146 370 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 GSK3BP49841 420 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CDKN2DP55273 166 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 FPGSQ05932 587 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PPIL2Q13356 520 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 POLD3Q15054 466 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ATP6AP1Q15904 470 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 MOGQ16653 247 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 DENND5AQ6IQ26 1287 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PAQR9Q6ZVX9 377 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ZNF354CQ86Y25 554 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 RIOX2Q8IUF8 465 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PTGR2Q8N8N7 351 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 TRPV3Q8NET8 790 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 KCTD14Q9BQ13 255 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 NSMCE4AQ9NXX6 385 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 VPS51Q9UID3 782 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CDH7Q9ULB5 785 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CSADQ9Y600 493 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 RAD54BQ9Y620 910 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ZFC3H1O60293 1989 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ERI2A8K979 691 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 UBXN8O00124 270 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CYP2C9P11712 490 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 GFAPP14136 432 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ZNF12P17014 697 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 IDUAP35475 653 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 LIPEQ05469 1076 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PAGE3Q5JUK9 113 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 INTS11Q5TA45 600 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SNX27Q96L92 541 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ALG2Q9H553 416 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 RBM22Q9NW64 420 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 TUBA8Q9NY65 449 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 MCM3APO60318 1980 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 KRBA1A5PL33 1030 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 AXIN1O15169 862 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 NOBOXO60393 691 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 RASAL1O95294 804 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 GSTT2P0CG29 244 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 GSTT2BP0CG30 244 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 LAPTM5Q13571 262 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 KCTD2Q14681 263 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 SPCS2Q15005 226 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TMTC4Q5T4D3 741 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 MIER2Q8N344 545 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TWIST2Q8WVJ9 160 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 HPS1Q92902 700 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 PTERQ96BW5 349 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-202ENST00000273342 INTS7Q9NVH2 962 aaKnown RBP12.9□□□□□ -0.34
COL8A1-202ENST00000273342 PTBP2Q9UKA9 531 aaKnown RBP12.9□□□□□ -0.34
COL8A1-202ENST00000273342 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 RLFQ13129 1914 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 CRCPO75575 148 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
COL8A1-202ENST00000273342 LDLRP01130 860 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 LCTP09848 1927 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 PIRTP0C851 137 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TCF3P15923 654 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 GALNT2Q10471 571 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 FAM187BQ17R55 369 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TIGD2Q4W5G0 525 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 UNC50Q53HI1 259 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 HECTD2Q5U5R9 776 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 SLC30A3Q99726 388 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 CHID1Q9BWS9 393 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 TRIM15Q9C019 465 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
COL8A1-202ENST00000273342 PIN4Q9Y237 131 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms