RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 A0A1B0GTL3 188 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 AQP12BA6NM10 295 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 TNK2Q07912 1038 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 ATP6AP1Q15904 470 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 KIAA0408Q6ZU52 694 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 CILP2Q8IUL8 1156 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 AQP12AQ8IXF9 295 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 MIER2Q8N344 545 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 ZNHIT2Q9UHR6 403 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 USP22Q9UPT9 525 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 FNDC1Q4ZHG4 1894 aaPredicted RBP27.48■■□□□ 1.99
CBX4-201ENST00000269397 PGFP49763 221 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 ECT2LQ008S8 904 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 GALNT1Q10472 559 aaPredicted RBP27.48■■□□□ 1.99
CBX4-201ENST00000269397 BNIP3Q12983 259 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 PFKFB4Q16877 469 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 PAN2Q504Q3 1202 aaKnown RBP27.48■■□□□ 1.99
CBX4-201ENST00000269397 KCTD8Q6ZWB6 473 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 PACRGLQ8N7B6 248 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 LRRC58Q96CX6 371 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 TSPAN17Q96FV3 270 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 MYRFLQ96LU7 910 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 HOPXQ9BPY8 73 aaPredicted RBP27.48■■□□□ 1.99
CBX4-201ENST00000269397 PAAF1Q9BRP4 392 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 PRKD2Q9BZL6 878 aa27.48■■□□□ 1.99
CBX4-201ENST00000269397 RRN3P2A6NIE6 340 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 TREHO43280 583 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 SNAP29O95721 258 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 CASP2P42575 452 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 HERVK_113P63132 956 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 RPS6KA2Q15349 733 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 FCRL2Q96LA5 508 aaPredicted RBP27.47■■□□□ 1.99
CBX4-201ENST00000269397 ERVK-6Q9BXR3 956 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 TRIM15Q9C019 465 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 TUBB1Q9H4B7 451 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 PTBP2Q9UKA9 531 aaKnown RBP27.47■■□□□ 1.99
CBX4-201ENST00000269397 DOLKQ9UPQ8 538 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 RBM47A0AV96 593 aaKnown RBP27.47■■□□□ 1.99
CBX4-201ENST00000269397 UBXN8O00124 270 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 DYNC1LI2O43237 492 aaPredicted RBP27.47■■□□□ 1.99
CBX4-201ENST00000269397 B4GAT1O43505 415 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 HGFP14210 728 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 CCR3P51677 355 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 DIO3P55073 304 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 MYLPFQ96A32 169 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 DCPSQ96C86 337 aaKnown RBP27.47■■□□□ 1.99
CBX4-201ENST00000269397 KLHL5Q96PQ7 755 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 NT5MQ9NPB1 228 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 ACTR3BQ9P1U1 418 aa27.47■■□□□ 1.99
CBX4-201ENST00000269397 CD86P42081 329 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 ATP4BP51164 291 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 PTPRCAPQ14761 206 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 OGFOD2Q6N063 350 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 ANKRD13AQ8IZ07 590 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 SEPT8Q92599 483 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 SMARCD1Q96GM5 515 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 PPP1R10Q96QC0 940 aaKnown RBP27.46■■□□□ 1.99
CBX4-201ENST00000269397 TTC3P53804 2025 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 GFAPP14136 432 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 ZNF33AQ06730 810 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 DUSP28Q4G0W2 176 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 LCN8Q6JVE9 175 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 CALML6Q8TD86 181 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 ADAMTS16Q8TE57 1224 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 L3HYPDHQ96EM0 354 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 FEM1CQ96JP0 617 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 SEPHS2Q99611 448 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 TRMOQ9BU70 441 aa27.46■■□□□ 1.99
CBX4-201ENST00000269397 POLR3BQ9NW08 1133 aaPredicted RBP27.46■■□□□ 1.99
CBX4-201ENST00000269397 BBIP1A8MTZ0 92 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 RASAL1O95294 804 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 HMOX2P30519 316 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 SERPINH1P50454 418 aaKnown RBP27.45■■□□□ 1.99
CBX4-201ENST00000269397 IHHQ14623 411 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 DHRSXQ8N5I4 330 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 MINDY1Q8N5J2 469 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 TRPV3Q8NET8 790 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 TBC1D15Q8TC07 691 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 TEX37Q96LM6 180 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 RGS18Q9NS28 235 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 KCNH4Q9UQ05 1017 aa27.45■■□□□ 1.99
CBX4-201ENST00000269397 NYNRINQ9P2P1 1898 aaKnown RBP27.45■■□□□ 1.99
CBX4-201ENST00000269397 HSD17B1P14061 328 aa27.45■■□□□ 1.98
CBX4-201ENST00000269397 ZNF135P52742 658 aaPredicted RBP27.45■■□□□ 1.98
CBX4-201ENST00000269397 ABRAXAS1Q6UWZ7 409 aa27.45■■□□□ 1.98
CBX4-201ENST00000269397 C14orf80Q86SX3 495 aa27.45■■□□□ 1.98
CBX4-201ENST00000269397 CCDC117Q8IWD4 279 aaPredicted RBP27.45■■□□□ 1.98
CBX4-201ENST00000269397 TMEM74Q96NL1 305 aa27.45■■□□□ 1.98
CBX4-201ENST00000269397 SLC38A7Q9NVC3 462 aa27.45■■□□□ 1.98
CBX4-201ENST00000269397 AZIN1O14977 448 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 BAIAP3O94812 1187 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 S1PR4O95977 384 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 CYBRD1Q53TN4 286 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 KDELC1Q6UW63 502 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 PHYKPLQ8IUZ5 450 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SLAMF8Q9P0V8 285 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SMIM35A0A1B0GVV1 85 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 CASTOR2A6NHX0 329 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 AXLP30530 894 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 TFAP2DQ7Z6R9 452 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms