RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MATN2O00339 956 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 STX7O15400 261 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 HTRA2O43464 458 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 CYBBP04839 570 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ZNF37AP17032 561 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 HLA-FP30511 346 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 CDKN1CP49918 316 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 RPL14P50914 215 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 HK2P52789 917 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PRKAA1Q13131 559 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PEX6Q13608 980 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 TBCCQ15814 346 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ARMC12Q5T9G4 340 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PIWIL4Q7Z3Z4 852 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ISCA2Q86U28 154 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 METTL3Q86U44 580 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PIANPQ8IYJ0 282 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 MAPK15Q8TD08 544 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 EID2BQ96D98 161 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 POMKQ9H5K3 350 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 IL17CQ9P0M4 197 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 EVLQ9UI08 416 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ZNF711Q9Y462 761 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 A8MT66 165 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 GRM6O15303 877 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PENKP01210 267 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ESRRAP11474 423 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 BMP1P13497 986 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 CD1DP15813 335 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 EPCAMP16422 314 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 TFEBP19484 476 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 AOC1P19801 751 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 MC4RP32245 332 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 SERPINB5P36952 375 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 MAPK8P45983 427 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 SLC20A2Q08357 652 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 UBAP2LQ14157 1087 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 SETMARQ53H47 684 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PITRM1Q5JRX3 1037 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 PSAPL1Q6NUJ1 521 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 C7orf61Q8IZ16 206 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 MICAL1Q8TDZ2 1067 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 CCDC126Q96EE4 140 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 BTBD10Q9BSF8 475 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 BPIFA1Q9NP55 256 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 NCKIPSDQ9NZQ3 722 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 ZDHHC2Q9UIJ5 367 aa16.6■□□□□ 0.25
CCDC40-201ENST00000269318 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
CCDC40-201ENST00000269318 NOTCH4Q99466 2003 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 SOBPA7XYQ1 873 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 A8MUI8 341 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 PRR5-ARHGAP8B1AHC4 643 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 DIAPH2O60879 1101 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
CCDC40-201ENST00000269318 SOCS5O75159 536 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 IPO13O94829 963 aaKnown RBP16.59■□□□□ 0.25
CCDC40-201ENST00000269318 ATP6V1G2O95670 118 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 HMGCLP35914 325 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 CTSOP43234 321 aaPredicted RBP16.59■□□□□ 0.25
CCDC40-201ENST00000269318 KCNC1P48547 511 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 EPHB1P54762 984 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 ARHGAP8P85298 464 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 XIAPP98170 497 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 SLC9B1Q4ZJI4 515 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 PRSS36Q5K4E3 855 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 RINLQ6ZS11 566 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 TMEM25Q86YD3 366 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 PTERQ96BW5 349 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 BIRC8Q96P09 236 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 ALG9Q9H6U8 611 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
CCDC40-201ENST00000269318 HDAC3O15379 428 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 GRID2O43424 1007 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 ZBTB14O43829 449 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 NDUFS3O75489 264 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.25
CCDC40-201ENST00000269318 ENO1P06733 434 aaKnown RBP16.58■□□□□ 0.25
CCDC40-201ENST00000269318 ALPIP09923 528 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 SRCP12931 536 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 SYN1P17600 705 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 CTPS1P17812 591 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 FMO4P31512 558 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 BCL2L1Q07817 233 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 FUT11Q495W5 492 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 ARHGAP15Q53QZ3 475 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.25
CCDC40-201ENST00000269318 LYSMD3Q7Z3D4 306 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 LONP2Q86WA8 852 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 CCNYL1Q8N7R7 359 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 STON2Q8WXE9 905 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 CNDP1Q96KN2 507 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 CADM1Q9BY67 442 aaKnown RBP16.58■□□□□ 0.25
CCDC40-201ENST00000269318 TNKS2Q9H2K2 1166 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 TAS2R1Q9NYW7 299 aa16.58■□□□□ 0.25
CCDC40-201ENST00000269318 TAGLN3Q9UI15 199 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms