RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 E2F7Q96AV8 911 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ECHDC3Q96DC8 303 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 C7orf26Q96N11 449 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ZNF641Q96N77 438 aaPredicted RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 LYSMD1Q96S90 227 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 FBXO6Q9NRD1 293 aaPredicted RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 EVLQ9UI08 416 aaPredicted RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 PPIL1Q9Y3C6 166 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 WDFY4Q6ZS81 3184 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ANKRD36A6QL64 1941 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 A0A0J9YYE9 177 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 WDR91A4D1P6 747 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 PFDN6O15212 129 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 TRBC1P01850 177 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 PIRTP0C851 137 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 NEFHP12036 1026 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CTSOP43234 321 aaPredicted RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 STC1P52823 247 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 SLC12A2P55011 1212 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 RAD51Q06609 339 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 MYLK3Q32MK0 819 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CARD16Q5EG05 197 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 FAM78AQ5JUQ0 283 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 MBLAC2Q68D91 279 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 FAM45BPQ6NSW5 357 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 FAM47EQ6ZV65 393 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 RAPH1Q70E73 1250 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CAMK1DQ8IU85 385 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 OTUD6BQ8N6M0 293 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ACVR1CQ8NER5 493 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 FAM45AQ8TCE6 357 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 PDCD6IPQ8WUM4 868 aaKnown RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 ELMO2Q96JJ3 720 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 LRRC3BQ96PB8 259 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 OMDQ99983 421 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 KXD1Q9BQD3 176 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 TSSK1BQ9BXA7 367 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CAB39LQ9H9S4 337 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 POPDC3Q9HBV1 291 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 SLCO1B3Q9NPD5 702 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 COPG2Q9UBF2 871 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ACOT9Q9Y305 439 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ZNF711Q9Y462 761 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 MUC6Q6W4X9 2439 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 AURKAO14965 403 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 STX7O15400 261 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 ECI2O75521 394 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 POP4O95707 220 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 TOP3BO95985 862 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 PDGFBP01127 241 aaPredicted RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 SRPRAP08240 638 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 POLR2EP19388 210 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 BGNP21810 368 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 FCARP24071 287 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 ABCG1P45844 678 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 STK19P49842 368 aaPredicted RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 PDGFRLQ15198 375 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 DLG2Q15700 870 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 FASTKD1Q53R41 847 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 AARS2Q5JTZ9 985 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 CNSTQ6PJW8 725 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 OTOAQ7RTW8 1153 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 SLC41A1Q8IVJ1 513 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 FBXL6Q8N531 539 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 SREK1Q8WXA9 508 aaKnown RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 VOPP1Q96AW1 172 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 RSPRY1Q96DX4 576 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 NMRAL1Q9HBL8 299 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 SLC2A4RGQ9NR83 387 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 IL17CQ9P0M4 197 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 TMEM216Q9P0N5 145 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 MARCH4Q9P2E8 410 aaPredicted RBP15.34■□□□□ 0.05
COPS3-201ENST00000268717 PKP3Q9Y446 797 aa15.34■□□□□ 0.05
COPS3-201ENST00000268717 CAPN8A6NHC0 703 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 SNNO75324 88 aaPredicted RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 H2AFYO75367 372 aaKnown RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 KLHL2O95198 593 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 CISD3P0C7P0 127 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
COPS3-201ENST00000268717 GRK2P25098 689 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 SLC8A1P32418 973 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 ABL2P42684 1182 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 SUOXP51687 545 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 PRKAA2P54646 552 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 TAS2R39P59534 338 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 PCLAFQ15004 111 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 TANGO2Q6ICL3 276 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 ETFBKMTQ8IXQ9 262 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 PLD6Q8N2A8 252 aaKnown RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 GPATCH11Q8N954 259 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 CCDC63Q8NA47 563 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 KDM1BQ8NB78 822 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 ELSPBP1Q96BH3 223 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 RPL10LQ96L21 214 aaKnown RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 TNKS2Q9H2K2 1166 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 SUDS3Q9H7L9 328 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms