RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 A0A087X1B8 175 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 A0A0U1RQS6 177 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 TSPAN11A1L157 253 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PRRT4C9JH25 899 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 BNIP3LO60238 219 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 SLC4A1P02730 911 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 UGT2B4P06133 528 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PRSS56P0CW18 603 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 SAT1P21673 171 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 BGNP21810 368 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 MC4RP32245 332 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 LTBRP36941 435 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 MTHFRP42898 656 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 RUNX3Q13761 415 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
TPM1-201ENST00000267996 FAM45BPQ6NSW5 357 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 FAM47EQ6ZV65 393 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 CCDC91Q7Z6B0 441 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 NUDCD3Q8IVD9 361 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 CACNA2D3Q8IZS8 1091 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 TNS4Q8IZW8 715 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 FAM45AQ8TCE6 357 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 LPGAT1Q92604 370 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 NXPE3Q969Y0 559 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 LRIG1Q96JA1 1093 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 MSLNLQ96KJ4 702 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 GPR78Q96P69 363 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 NDNQ99608 321 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 MECRQ9BV79 373 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 BPIFA1Q9NP55 256 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 KIAA1549LQ6ZVL6 1849 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 SCN8AQ9UQD0 1980 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 REV3LO60673 3130 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 C1orf232A0A0U1RR37 186 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 EBAG9O00559 213 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PSMC3P17980 439 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
TPM1-201ENST00000267996 PMLP29590 882 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 OPRD1P41143 372 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 SUOXP51687 545 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PGGT1BP53609 377 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 SLC12A2P55011 1212 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PCLAFQ15004 111 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 CRTC1Q6UUV9 634 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 USP45Q70EL2 814 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 CBARPQ8N350 705 aaPredicted RBP16.34■□□□□ 0.21
TPM1-201ENST00000267996 TMEM151AQ8N4L1 468 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 AARSD1Q9BTE6 412 aaKnown RBP16.34■□□□□ 0.21
TPM1-201ENST00000267996 NMRAL1Q9HBL8 299 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 COPG2Q9UBF2 871 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 MTCH2Q9Y6C9 303 aa16.34■□□□□ 0.21
TPM1-201ENST00000267996 NPIPB15A6NHN6 443 aaPredicted RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 GAPDHSO14556 408 aaPredicted RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 ECI2O75521 394 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 KLHL2O95198 593 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 CLDN7O95471 211 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 APOA4P06727 396 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 FDXRP22570 491 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 ALDH3A1P30838 453 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 SLC26A3P40879 764 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 PTPN5P54829 565 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 CDKN2DP55273 166 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 TIAL1Q01085 375 aaKnown RBP eCLIP16.33■□□□□ 0.29e-7■■■□□ 18.9
TPM1-201ENST00000267996 DLG1Q12959 904 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 GRM2Q14416 872 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 ZNF460Q14592 562 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 ITIH4Q14624 930 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 CES4AQ5XG92 561 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 BRAT1Q6PJG6 821 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 PARM1Q6UWI2 310 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 C6orf89Q6UWU4 347 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 SPATA21Q7Z572 469 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 YAF2Q8IY57 180 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 TERB1Q8NA31 727 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 CCDC197Q8NCU1 140 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 GRIN3AQ8TCU5 1115 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 HCAR2Q8TDS4 363 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 KCTD4Q8WVF5 259 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 KLHL32Q96NJ5 620 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 OSBPL1AQ9BXW6 950 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 POMKQ9H5K3 350 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 BRD9Q9H8M2 597 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 CLDND1Q9NY35 253 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 VPS9D1Q9Y2B5 631 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 CRYL1Q9Y2S2 319 aa16.33■□□□□ 0.2
TPM1-201ENST00000267996 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 ZNF106Q9H2Y7 1883 aaKnown RBP16.33■□□□□ 0.2
TPM1-201ENST00000267996 TARM1B6A8C7 271 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 CPA3P15088 417 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 GJA4P35212 333 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 EIF2DP41214 584 aaKnown RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 TTPAP49638 278 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 CDKN1CP49918 316 aaPredicted RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 ST8SIA6P61647 398 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 IRX4P78413 519 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms