RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FAM151AQ8WW52 585 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 OR52E6Q96RD3 313 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 UMODL1Q5DID0 1318 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 H3BM21 787 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ATXN7L2Q5T6C5 722 aaPredicted RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 RAP2CQ9Y3L5 183 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 GIT2Q14161 759 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 CXorf57Q6NSI4 855 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 MAN2B2Q9Y2E5 1009 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 A0A0A0MRY4 1105 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 BCKDKO14874 412 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 GNAO1P09471 354 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 MSL3P1P0C860 447 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TMEM17Q86X19 198 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 NXNL1Q96CM4 212 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 CERS2Q96G23 380 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 SPATA13Q96N96 652 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ALG9Q9H6U8 611 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 C3orf14Q9HBI5 128 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 PSKH1P11801 424 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ASMTP46597 345 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 SLC9A3P48764 834 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 PSEN1P49768 467 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 RNASE12Q5GAN4 147 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 AMIGO1Q86WK6 493 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 SLC41A1Q8IVJ1 513 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 C15orf40Q8WUR7 153 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ELMO1Q92556 727 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 IRF8Q02556 426 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 DDR1Q08345 913 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ELP6Q0PNE2 266 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ITGA7Q13683 1181 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 MRPL9Q9BYD2 267 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ATXN3LQ9H3M9 355 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CTSKP43235 329 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 DPYSL3Q14195 570 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CXorf40AQ8TE69 158 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 POPDC2Q9HBU9 364 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 PCYOX1Q9UHG3 505 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ARL5CA6NH57 179 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 FESP07332 822 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 HOXC12P31275 282 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 MANFP55145 182 aaKnown RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 GCNT1Q02742 428 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 FAM47BQ8NA70 645 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 MKL1Q969V6 931 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CYP4F8P98187 520 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CCL15Q16663 113 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CA9Q16790 459 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 SEMA4BQ9NPR2 832 aaPredicted RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CRB1P82279 1406 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 TIE1P35590 1138 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 HERC3Q15034 1050 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 KCNT2Q6UVM3 1135 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 PHC3Q8NDX5 983 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 SCGB3A2Q96PL1 93 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 ABCB9Q9NP78 766 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 DAGLAQ9Y4D2 1042 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 RIIAD1A6NNX1 92 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 NTRK1P04629 796 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 SRCP12931 536 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 SLC7A2P52569 658 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 TPK1Q9H3S4 243 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 MAP1BP46821 2468 aaKnown RBP12.09□□□□□ -0.47
SRRM4-201ENST00000267260 NDUFS2O75306 463 aa12.09□□□□□ -0.47
SRRM4-201ENST00000267260 PRKD3O94806 890 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms