RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ARVCFO00192 962 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 TXNDC9O14530 226 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 CASQ2O14958 399 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 UBDO15205 165 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 CD1DP15813 335 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ATF6P18850 670 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 HDCP19113 662 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 IMPDH1P20839 514 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 HOXD9P28356 352 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 PEX19P40855 299 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ALDH1A3P47895 512 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.359e-11■■■■■ 59.7
CPSF6-201ENST00000266679 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 UNC50Q53HI1 259 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 REP15Q6BDI9 236 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 TMEM173Q86WV6 379 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 FAM126BQ8IXS8 530 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 FAM156AQ8NDB6 213 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ADA2Q9NZK5 511 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ZFP37Q9Y6Q3 630 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 LRRC14BA6NHZ5 514 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 UBXN8O00124 270 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ENPP3O14638 875 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ACSL4O60488 711 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 NBNO60934 754 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 GPC4O75487 556 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ALDH2P05091 517 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 SERPINF2P08697 491 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 UQCRBP14927 111 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 RGRP47804 291 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 PSME3P61289 254 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 OR4D1Q15615 310 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 MMEL1Q495T6 779 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 OGFRL1Q5TC84 451 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 L3HYPDHQ96EM0 354 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 MRPL1Q9BYD6 325 aaKnown RBP12.89□□□□□ -0.35
CPSF6-201ENST00000266679 NACA2Q9H009 215 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 CCDC167Q9P0B6 97 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
CPSF6-201ENST00000266679 MYO9BQ13459 2157 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 UBA6A0AVT1 1052 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 PSMD12O00232 456 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 TRIM38O00635 465 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 NDST3O95803 873 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 PMLP29590 882 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 INHBCP55103 352 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 CDH13P55290 713 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 XIAPP98170 497 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 GNA12Q03113 381 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 FPGSQ05932 587 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 LAMB3Q13751 1172 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 APLFQ8IW19 511 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 GPR150Q8NGU9 434 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 BRSK1Q8TDC3 778 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 POLR3BQ9NW08 1133 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 UBA2Q9UBT2 640 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 H7C4K7 107 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ADAM12O43184 909 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 GJB5O95377 273 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SELPP16109 830 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 OGNP20774 298 aaKnown RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SLC26A3P40879 764 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 KPNA1P52294 538 aaPredicted RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 OXCT1P55809 520 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 RPS24P62847 133 aaKnown RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 HERVK_113P63132 956 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 FOXB2Q5VYV0 432 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ICA1LQ8NDH6 482 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 DCUN1D1Q96GG9 259 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 LRGUKQ96M69 825 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 KLHL32Q96NJ5 620 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ZNF599Q96NL3 588 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 GCNAQ96QF7 691 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 TRIB3Q96RU7 358 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms