RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CRYBG1Q9Y4K1 1723 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 GLYATL1P3A0A0U1RQE8 302 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 GRIA3P42263 894 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 ASZ1Q8WWH4 475 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 MIR1-1HGQ9H1L0 117 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 PACSIN3Q9UKS6 424 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 FCF1Q9Y324 198 aaKnown RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 A0A1W2PRU2 124 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 HS6ST1O60243 411 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 IPO13O94829 963 aaKnown RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 SLC35B2Q8TB61 432 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 PROX1Q92786 737 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 PLD4Q96BZ4 506 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 HAPLN3Q96S86 360 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 UNC93B1Q9H1C4 597 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 PRKAG3Q9UGI9 489 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 YIPF1Q9Y548 306 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ABHD14A-ACY1A0A1B0GW23 586 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 INSIG1O15503 277 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 HNRNPCP07910 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 SLC10A3P09131 477 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 SEMA5AQ13591 1074 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 MAMDC4Q6UXC1 1216 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 CUZD1Q86UP6 607 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 GPR180Q86V85 440 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ACAT2Q9BWD1 397 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ZNF711Q9Y462 761 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 SLC28A1O00337 649 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 RGS5O15539 181 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 APODP05090 189 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 POLD2P49005 469 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 APLP1P51693 650 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 LPIN1Q14693 890 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 NCF4Q15080 339 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 PPM1JQ5JR12 505 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ZDHHC20Q5W0Z9 365 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ALYREFQ86V81 257 aaKnown RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 KRT73Q86Y46 540 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 FBXO30Q8TB52 745 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 RCN3Q96D15 328 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 AHCYL2Q96HN2 611 aaKnown RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 C1orf50Q9BV19 199 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 DDX28Q9NUL7 540 aaKnown RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 FOXO6A8MYZ6 492 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ENTPD5O75356 428 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 IDO1P14902 403 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 BLVRAP53004 296 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 FPGSQ05932 587 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 FGD3Q5JSP0 725 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 NET1Q7Z628 596 aaPredicted RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 SETD9Q8NE22 299 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 PTCD3Q96EY7 689 aaKnown RBP15.4■□□□□ 0.06
TIMP3-201ENST00000266085 ARHGAP39Q9C0H5 1083 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 INSL6Q9Y581 213 aa15.4■□□□□ 0.06
TIMP3-201ENST00000266085 NDUFS2O75306 463 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 METTL18O95568 372 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 LINC00032P0C843 101 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 COL6A1P12109 1028 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 SYN1P17600 705 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 AMD1P17707 334 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 NTSP30990 170 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 NRLP54845 237 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 MPP1Q00013 466 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CPA6Q8N4T0 437 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CLP1Q92989 425 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 NXNL1Q96CM4 212 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ZMAT2Q96NC0 199 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 DUS2Q9NX74 493 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 IGSF9Q9P2J2 1179 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 LZTS1Q9Y250 596 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 C4BP0C0L5 1744 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 TNFAIP8O95379 198 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 SLC11A1P49279 550 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CXCR3P49682 368 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 AP1S1P61966 158 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 C1DQ13901 141 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CNKSR3Q6P9H4 555 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 PAGE2Q7Z2X7 111 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 TDRPQ86YL5 185 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ADHFE1Q8IWW8 467 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 EMID1Q96A84 441 aaPredicted RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 SEMA6AQ9H2E6 1030 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 C12orf65Q9H3J6 166 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 REEP1Q9H902 201 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 LGALS13Q9UHV8 139 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 TLR6Q9Y2C9 796 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 NUP98P52948 1817 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 PRR5-ARHGAP8B1AHC4 643 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CAPN15O75808 1086 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 RPL3P39023 403 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ARHGAP8P85298 464 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 INCA1Q0VD86 236 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 SPIDRQ14159 915 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CAMK1DQ8IU85 385 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF276Q8N554 614 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms