RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ILKAPQ9H0C8 392 aaPredicted RBP8.78□□□□□ -1
VAPB-201ENST00000265619 DSN1Q9H410 356 aa8.78□□□□□ -1
VAPB-201ENST00000265619 TMEM181Q9P2C4 612 aa8.78□□□□□ -1
VAPB-201ENST00000265619 BAG5Q9UL15 447 aa8.78□□□□□ -1
VAPB-201ENST00000265619 UBIAD1Q9Y5Z9 338 aa8.78□□□□□ -1
VAPB-201ENST00000265619 BRCA1P38398 1863 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 DHRS12A0PJE2 317 aa8.77□□□□□ -1
VAPB-201ENST00000265619 PTGES3LE9PB15 166 aa8.77□□□□□ -1
VAPB-201ENST00000265619 HNRNPDLO14979 420 aaKnown RBP8.77□□□□□ -1
VAPB-201ENST00000265619 NRP2O60462 931 aa8.77□□□□□ -1
VAPB-201ENST00000265619 TSPAN9O75954 239 aa8.77□□□□□ -1
VAPB-201ENST00000265619 POLR2CP19387 275 aaPredicted RBP8.77□□□□□ -1
VAPB-201ENST00000265619 PCMT1P22061 227 aa8.77□□□□□ -1
VAPB-201ENST00000265619 SLC12A1Q13621 1099 aa8.77□□□□□ -1
VAPB-201ENST00000265619 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1
VAPB-201ENST00000265619 ZBTB33Q86T24 672 aa8.77□□□□□ -1
VAPB-201ENST00000265619 C12orf56Q8IXR9 622 aa8.77□□□□□ -1
VAPB-201ENST00000265619 ADGRG5Q8IZF4 528 aa8.77□□□□□ -1
VAPB-201ENST00000265619 SFRP1Q8N474 314 aa8.77□□□□□ -1
VAPB-201ENST00000265619 TMEM151AQ8N4L1 468 aa8.77□□□□□ -1
VAPB-201ENST00000265619 CNTD1Q8N815 330 aa8.77□□□□□ -1
VAPB-201ENST00000265619 C2orf69Q8N8R5 385 aa8.77□□□□□ -1
VAPB-201ENST00000265619 GLB1L3Q8NCI6 653 aaPredicted RBP8.77□□□□□ -1
VAPB-201ENST00000265619 LSM14AQ8ND56 463 aaKnown RBP8.77□□□□□ -1
VAPB-201ENST00000265619 RHOXF1Q8NHV9 184 aa8.77□□□□□ -1
VAPB-201ENST00000265619 DYNC2LI1Q8TCX1 351 aa8.77□□□□□ -1
VAPB-201ENST00000265619 TFAP2BQ92481 460 aa8.77□□□□□ -1
VAPB-201ENST00000265619 OMA1Q96E52 524 aa8.77□□□□□ -1
VAPB-201ENST00000265619 DACH2Q96NX9 599 aa8.77□□□□□ -1
VAPB-201ENST00000265619 AGAP2Q99490 1192 aa8.77□□□□□ -1
VAPB-201ENST00000265619 SLIRPQ9GZT3 109 aaKnown RBP8.77□□□□□ -1
VAPB-201ENST00000265619 TMEM206Q9H813 350 aa8.77□□□□□ -1
VAPB-201ENST00000265619 GBA2Q9HCG7 927 aaPredicted RBP8.77□□□□□ -1
VAPB-201ENST00000265619 ARHGAP28Q9P2N2 729 aa8.77□□□□□ -1
VAPB-201ENST00000265619 MCM3APO60318 1980 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 DICER1Q9UPY3 1922 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 COL2A1P02458 1487 aaPredicted RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 CCDC78A2IDD5 438 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SDHDO14521 159 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 DHX15O43143 795 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 SEC24AO95486 1093 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PRKACAP17612 351 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 MIPP30301 263 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ZNF157P51786 506 aaPredicted RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 PTPN5P54829 565 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SESN2P58004 480 aaPredicted RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 GTF2BQ00403 316 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 TNFAIP2Q03169 654 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ILF2Q12905 390 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 PRAMEF19Q5SWL8 479 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 RBM23Q86U06 439 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 BSNDQ8WZ55 320 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 MUL1Q969V5 352 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 RNF170Q96K19 258 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 NEDD4LQ96PU5 975 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 FYTTD1Q96QD9 318 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 RIT2Q99578 217 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 FAM96AQ9H5X1 160 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SP140LQ9H930 580 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SPAG4Q9NPE6 437 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 NDFIP2Q9NV92 336 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 MAGED2Q9UNF1 606 aaPredicted RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 CDYLQ9Y232 598 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PCDHB3Q9Y5E6 796 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PPP2R3BQ9Y5P8 575 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 A0A1W2PQ72 361 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PABPN1LA6NDY0 278 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 TRIM13O60858 407 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 STAM2O75886 525 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SEMA3DO95025 777 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PSAPP07602 524 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PROZP22891 400 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 GSTM2P28161 218 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 PIGAP37287 484 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SERPINB9P50453 376 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 EPS8Q12929 822 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ORC1Q13415 861 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 LBX2Q6XYB7 198 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ADCK1Q86TW2 530 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 ZNF677Q86XU0 584 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 HS3ST5Q8IZT8 346 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 OR7A2PQ8NGA2 310 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 GIPC2Q8TF65 315 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 S100ZQ8WXG8 99 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 MFSD14AQ96MC6 490 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 C12orf10Q9HB07 376 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 FBRSL1Q9HCM7 1045 aaKnown RBP8.77□□□□□ -1.01
VAPB-201ENST00000265619 ZNF302Q9NR11 478 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 FBXO10Q9UK96 956 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 SNX6Q9UNH7 406 aa8.77□□□□□ -1.01
VAPB-201ENST00000265619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SNTNA6NMZ2 147 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SYCE1LA8MT33 242 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 CTDSP2O14595 271 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SLC22A1O15245 554 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms