RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 MID1O15344 667 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 KDM4BO94953 1096 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 IGSF6O95976 241 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 RARAP10276 462 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 MAGEA12P43365 314 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 MAN2A2P49641 1150 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 AP2S1P53680 142 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 IRF8Q02556 426 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 ELOA2Q8IYF1 753 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 OSBPL11Q9BXB4 747 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 BPIFA1Q9NP55 256 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 POMZP3Q6PJE2 187 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PTGR2Q8N8N7 351 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 OR2L3Q8NG85 312 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 VANGL1Q8TAA9 524 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 SMARCD1Q96GM5 515 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 NDNQ99608 321 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 TBC1D10AQ9BXI6 508 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 TMEM168Q9H0V1 697 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 NFKBIEO00221 500 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 LSM8O95777 96 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 GABRR2P28476 465 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 GRIA4P48058 902 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 MCOLN2Q8IZK6 566 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 INTS7Q9NVH2 962 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 A0A0B4J269 797 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 BUD23O43709 281 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 RSL1D1O76021 490 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 GJB6O95452 261 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 LTA4HP09960 611 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 TARBP2Q15633 366 aaKnown RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-202ENST00000262676 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 TNFAIP8L1Q8WVP5 186 aa12.86□□□□□ -0.35
TTC39A-202ENST00000262676 PLOD2O00469 737 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SDC2P34741 201 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SLC9A4Q6AI14 798 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 DENND1CQ8IV53 801 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-202ENST00000262676 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ART5Q96L15 291 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TSPAN16Q9UKR8 245 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 DCLK1O15075 740 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SHBGP04278 402 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 MYBL2P10244 700 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SMIM11AP58511 58 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 RHBDL3P58872 404 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 EVX2Q03828 476 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 GIT2Q14161 759 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 OR5T3Q8NGG3 340 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TCF12Q99081 682 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 HPF1Q9NWY4 346 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ARHGAP20Q9P2F6 1191 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TREHO43280 583 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 GIMD1P0DJR0 217 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TLE2Q04725 743 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ZMYND11Q15326 602 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 LPCAT4Q643R3 524 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SCUBE3Q8IX30 993 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SUCOQ9UBS9 1254 aaKnown RBP12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 GZMAP12544 262 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 AXLP30530 894 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 TNFAIP8L3Q5GJ75 292 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 GALNT18Q6P9A2 607 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 RCN3Q96D15 328 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
TTC39A-202ENST00000262676 IKZF2Q9UKS7 526 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 CORO2BQ9UQ03 480 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ANXA5P08758 320 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 PPM1AP35813 382 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 LCN1P1Q5VSP4 162 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 AADACL2Q6P093 401 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 MINDY2Q8NBR6 621 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 SLC4A11Q8NBS3 891 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 PPP1R16AQ96I34 528 aa12.85□□□□□ -0.35
TTC39A-202ENST00000262676 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms