RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 HORMAD1Q86X24 394 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 RGL4Q8IZJ4 473 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PAF1Q8N7H5 531 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 C1orf216Q8TAB5 229 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PIGKQ92643 395 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 KLK6Q92876 244 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 ART4Q93070 314 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 TRIB3Q96RU7 358 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 RAB6BQ9NRW1 208 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 FAM153AQ9UHL3 310 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 EIF2B4Q9UI10 523 aaKnown RBP11.6□□□□□ -0.55
PFDN1-201ENST00000261813 GMEB2Q9UKD1 530 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PHTF1Q9UMS5 762 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PPIL1Q9Y3C6 166 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 PCDHGA5Q9Y5G8 931 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 CEP192Q8TEP8 1941 aa11.6□□□□□ -0.55
PFDN1-201ENST00000261813 A8MX80 341 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 J3QL48 77 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 NEMP1O14524 444 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 MMP20O60882 483 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 PMPCBO75439 489 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 METTL18O95568 372 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 ALPIP09923 528 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 ZSCAN5DPP0CG00 497 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 ETS1P14921 441 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 CA4P22748 312 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 LHCGRP22888 699 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 IVDP26440 423 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 CD27P26842 260 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 MAGEA6P43360 314 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 VPS41P49754 854 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 PLTPP55058 493 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 VSNL1P62760 191 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 RPS21P63220 83 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 FAM193AP78312 1265 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 MRPS25P82663 173 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 GALNT3Q14435 633 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 SLMAPQ14BN4 828 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 KCTD19Q17RG1 926 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 HIBCHQ6NVY1 386 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 DPPA4Q7L190 304 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 PRUNE1Q86TP1 453 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 SYT12Q8IV01 421 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 ZCCHC9Q8N567 271 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 GLIS1Q8NBF1 620 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 SCRN2Q96FV2 425 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 FEM1CQ96JP0 617 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 MCCC1Q96RQ3 725 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 FMO2Q99518 471 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 WRAP53Q9BUR4 548 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 MIR1-1HGQ9H1L0 117 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 EIF2B3Q9NR50 452 aaKnown RBP11.59□□□□□ -0.55
PFDN1-201ENST00000261813 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
PFDN1-201ENST00000261813 A0A0J9YYE9 177 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 A0A0U1RQS6 177 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 LOC285095A0A1B0GVY8 99 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 ESYT3A0FGR9 886 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 IGLON5A6NGN9 336 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 PRR5-ARHGAP8B1AHC4 643 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 PATE3B3GLJ2 98 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 WNT9AO14904 365 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 SLC31A1O15431 190 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TRBC1P01850 177 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TPSB2P20231 275 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TGM1P22735 817 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 GRIA4P48058 902 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 CARSP49589 748 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 LIG3P49916 1009 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 ITGA8P53708 1063 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 EPHB1P54762 984 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 GEMP55040 296 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 WNT3AP56704 352 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 RPL26P61254 145 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 ARHGAP8P85298 464 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 CDK18Q07002 472 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 SEMA5AQ13591 1074 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 NAA30Q147X3 362 aaPredicted RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TPSAB1Q15661 275 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 RNASEH2BQ5TBB1 312 aaKnown RBP11.58□□□□□ -0.56
PFDN1-201ENST00000261813 FAXCQ5TGI0 409 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 LINC00523Q86TU6 105 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 TSPAN33Q86UF1 283 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 KLHDC8BQ8IXV7 354 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 MCUQ8NE86 351 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 SLC6A18Q96N87 628 aa11.58□□□□□ -0.56
PFDN1-201ENST00000261813 C1QTNF2Q9BXJ5 285 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms