RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LHCGRP22888 699 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 CCR5P51681 352 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 CRADDP78560 199 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 PTPRRQ15256 657 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 CNGA3Q16281 694 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 CERCAMQ5T4B2 595 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 SEL1L3Q68CR1 1132 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 LRRC66Q68CR7 880 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 TSPAN33Q86UF1 283 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 IGDCC3Q8IVU1 814 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 ATOH1Q92858 354 aaPredicted RBP20.7■□□□□ 0.9
RTCA-201ENST00000260563 TTC25Q96NG3 672 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 EBNA1BP2Q99848 306 aaKnown RBP20.7■□□□□ 0.9
RTCA-201ENST00000260563 MAGEE1Q9HCI5 957 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 ZFR2Q9UPR6 939 aaKnown RBP20.7■□□□□ 0.9
RTCA-201ENST00000260563 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.7■□□□□ 0.9
RTCA-201ENST00000260563 MAD1L1Q9Y6D9 718 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 C1orf232A0A0U1RR37 186 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 MMP20O60882 483 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 TM7SF2O76062 418 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 IGHV4-34P06331 123 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 PIRTP0C851 137 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 C6P13671 934 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 MAT2AP31153 395 aaKnown RBP20.69■□□□□ 0.9
RTCA-201ENST00000260563 HSD17B3P37058 310 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 LIG3P49916 1009 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 KYNUQ16719 465 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 TMEM259Q4ZIN3 620 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 DENND2CQ68D51 928 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 CASC4Q6P4E1 433 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 LIPIQ6XZB0 460 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 ARMCX6Q7L4S7 300 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 SLC41A1Q8IVJ1 513 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 BLOC1S5Q8TDH9 187 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 BIRC7Q96CA5 298 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 STAMBPL1Q96FJ0 436 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 ZC3H10Q96K80 434 aaKnown RBP20.69■□□□□ 0.9
RTCA-201ENST00000260563 ZNF711Q9Y462 761 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 CACNA1HO95180 2353 aa20.69■□□□□ 0.9
RTCA-201ENST00000260563 METTL12A8MUP2 240 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 C10orf142B7Z368 130 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 PSMD11O00231 422 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 RIPK2O43353 540 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 TTC4O95801 387 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 DHPSP49366 369 aaPredicted RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 UAP1Q16222 522 aaPredicted RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 SETMARQ53H47 684 aaPredicted RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 CRTC1Q6UUV9 634 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 CCNJLQ8IV13 435 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 PALM2Q8IXS6 379 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 NAT9Q9BTE0 207 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 HACD3Q9P035 362 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 SAMD15Q9P1V8 674 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 ZC3H7BQ9UGR2 993 aaKnown RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 COQ6Q9Y2Z9 468 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 MAGEB16A2A368 324 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 IGLON5A6NGN9 336 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 LATO43561 262 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 LZTS3O60299 673 aaPredicted RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 SLC4A1P02730 911 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 MSLNQ13421 630 aaPredicted RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 CASP8Q14790 479 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 POU6F1Q14863 301 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 ZNF284Q2VY69 593 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 PCID2Q5JVF3 399 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 UBAP2Q5T6F2 1119 aaKnown RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 LYSMD4Q5XG99 296 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 LYSMD3Q7Z3D4 306 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 GLT6D1Q7Z4J2 308 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 PPHLN1Q8NEY8 458 aaKnown RBP20.68■□□□□ 0.9
RTCA-201ENST00000260563 GPR63Q9BZJ6 419 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 EPB41L4BQ9H329 900 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 TRABDQ9H4I3 376 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 ZFYVE1Q9HBF4 777 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 LRRC4CQ9HCJ2 640 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 RAB23Q9ULC3 237 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 SPO11Q9Y5K1 396 aa20.68■□□□□ 0.9
RTCA-201ENST00000260563 VPS13AQ96RL7 3174 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 A0A0U1RQS6 177 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 CLDN7O95471 211 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 ACSL3O95573 720 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 TSHRP16473 764 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 PGAM1P18669 254 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 NUDT1P36639 197 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 PTGER3P43115 390 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 SGCGQ13326 291 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 ACOX1Q15067 660 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 WDR45BQ5MNZ6 344 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 HDXQ7Z353 690 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 RGL4Q8IZJ4 473 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 KLK6Q92876 244 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 CFAP36Q96G28 342 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 RANBP9Q96S59 729 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 SLC17A9Q9BYT1 436 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 SOX13Q9UN79 622 aa20.67■□□□□ 0.9
RTCA-201ENST00000260563 MUC6Q6W4X9 2439 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 A0A1W2PPC4 97 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 C1SP09871 688 aa20.66■□□□□ 0.9
RTCA-201ENST00000260563 GPX6P59796 221 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms