RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GPR63Q9BZJ6 419 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 POLR1EQ9GZS1 481 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 SYTL2Q9HCH5 934 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 USP3Q9Y6I4 520 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 U3KQV3 271 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 UBR3Q6ZT12 1888 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MOXD2PA6NHM9 499 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 C2orf81A6NN90 581 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 H0Y626 953 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 PTGESO14684 152 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GPR182O15218 404 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 IRAK2O43187 625 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 TBC1D4O60343 1298 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GPR32O75388 356 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 TRIM16O95361 564 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GOT2P00505 430 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 CHRM1P11229 460 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 SLC2A4P14672 509 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GGT5P36269 586 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ARSDP51689 593 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZNF135P52742 658 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 DIO3P55073 304 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 LSM3P62310 102 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 HNRNPDQ14103 355 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 ACAP2Q15057 778 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CCL14Q16627 93 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CTXN3Q4LDR2 81 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ACBD5Q5T8D3 534 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 FAM45BPQ6NSW5 357 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 PAQR9Q6ZVX9 377 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 LGI2Q8N0V4 545 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 OR4K2Q8NGD2 314 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 NPLOC4Q8TAT6 608 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ITFG1Q8TB96 612 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 FAM45AQ8TCE6 357 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GIPC3Q8TF64 312 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GTF3C2Q8WUA4 911 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 GFM2Q969S9 779 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 TMEM74Q96NL1 305 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 PLEKHG4BQ96PX9 1271 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 SLC2A13Q96QE2 648 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZYG11BQ9C0D3 744 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MAF1Q9H063 256 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CXorf21Q9HAI6 301 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZFP14Q9HCL3 533 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CHCHD3Q9NX63 227 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 ZDHHC7Q9NXF8 308 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MARCH4Q9P2E8 410 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 ATAD5Q96QE3 1844 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 NPEPPSL1A6NEC2 478 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 F5H5T6 163 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 HTRA2O43464 458 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 SH3BP5O60239 455 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MAN1A2O60476 641 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CNTN5O94779 1100 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CELF2O95319 508 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 ZBTB11O95625 1053 aaPredicted RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 FYNP06241 537 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 TFPTP0C1Z6 253 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 KCNE1P15382 129 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CYP2C18P33260 490 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 STT3AP46977 705 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CCR3P51677 355 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 C21orf59P57076 290 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 NAA20P61599 178 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MRPS6P82932 125 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 PRKCQQ04759 706 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 LIPEQ05469 1076 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GRB7Q14451 532 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 HERC3Q15034 1050 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZBTB6Q15916 424 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZNF792Q3KQV3 632 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 KIAA0319Q5VV43 1072 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ABRAXAS1Q6UWZ7 409 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 PATL1Q86TB9 770 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 GPSM1Q86YR5 675 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 DCP1BQ8IZD4 617 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 RTL3Q8N8U3 475 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 SMG8Q8ND04 991 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 ZNF555Q8NEP9 628 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ZMIZ2Q8NF64 920 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 OR4L1Q8NH43 312 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 CDK15Q96Q40 435 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GPR21Q99679 349 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 SLC25A51Q9H1U9 297 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 ABCG8Q9H221 673 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 MIOSQ9NXC5 875 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 SMPD4Q9NXE4 827 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 SUCOQ9UBS9 1254 aaKnown RBP4.74□□□□□ -1.65
USP44-201ENST00000258499 RIMS3Q9UJD0 308 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 GJD2Q9UKL4 321 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 SLC8A2Q9UPR5 921 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 TRPV2Q9Y5S1 764 aa4.74□□□□□ -1.65
USP44-201ENST00000258499 COL4A5P29400 1685 aa4.73□□□□□ -1.65
USP44-201ENST00000258499 CCDC162PA2VCL2 907 aa4.73□□□□□ -1.65
USP44-201ENST00000258499 C7orf72A4D263 438 aa4.73□□□□□ -1.65
USP44-201ENST00000258499 KLHL33A6NCF5 533 aa4.73□□□□□ -1.65
USP44-201ENST00000258499 ENPP3O14638 875 aa4.73□□□□□ -1.65
USP44-201ENST00000258499 MAGEB3O15480 346 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms