RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TISP43B9A030 160 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 NCF1P14598 390 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 RAB10P61026 200 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 STX4Q12846 297 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 MS4A13Q5J8X5 152 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SYNPOQ8N3V7 929 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 ZNF614Q8N883 585 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 MAGEB18Q96M61 343 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 KLC4Q9NSK0 619 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 NAV1Q8NEY1 1877 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 TCRBV21S2A2A0A5A6 115 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 TOR1BO14657 336 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 KRT33AO76009 404 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 GLULP15104 373 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 S100A3P33764 101 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 GJA5P36382 358 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 OR2T3Q8NH03 318 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SCN3BQ9NY72 215 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 GOLGA8RI6L899 631 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 LIN7AO14910 233 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 NUDT14O95848 222 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 CRTC3Q6UUV7 619 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SCML4Q8N228 414 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 UBDO15205 165 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 EPN2O95208 641 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 NR2C1P13056 603 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 PSMA4P25789 261 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 WASP42768 502 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 TOMM20Q15388 145 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 PROX1Q92786 737 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 HERPUD2Q9BSE4 406 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 TMEM248Q9NWD8 314 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 M0QZQ0 153 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 HAS3O00219 553 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 ELK3P41970 407 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 XKR6Q5GH73 641 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 C22orf39Q6P5X5 142 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 RASGRP3Q8IV61 690 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 VPS4AQ9UN37 437 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 A0A1W2PPC1 479 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 GFRA2O00451 464 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 SLC7A4O43246 635 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 B3GALT2O43825 422 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 ULK1O75385 1050 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 CENPAP49450 140 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 SP140Q13342 867 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 FGL2Q14314 439 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 UAP1L1Q3KQV9 507 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 TRMT2BQ96GJ1 504 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 PLEKHG4BQ96PX9 1271 aa13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 THUMPD1Q9NXG2 353 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
PRPF38A-201ENST00000257181 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 MSI1O43347 362 aaKnown RBP13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 DUX1O43812 170 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 ITGA2P17301 1181 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 KCNJ1P48048 391 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 NRG3P56975 720 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 ZSCAN26Q16670 478 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 C2orf27AQ580R0 203 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 UBXN11Q5T124 520 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 WLSQ5T9L3 541 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 KCTD15Q96SI1 283 aaPredicted RBP13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 NDC1Q9BTX1 674 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 PDLIM7Q9NR12 457 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 SNX7Q9UNH6 387 aa13.4□□□□□ -0.27
PRPF38A-201ENST00000257181 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MAPK10P53779 464 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MIER2Q8N344 545 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 HNRNPLLQ8WVV9 542 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 WDR92Q96MX6 357 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MIOSQ9NXC5 875 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 DMTF1Q9Y222 760 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 AP2A1O95782 977 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 HNMTP50135 292 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 GALNTL6Q49A17 601 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 TCHHL1Q5QJ38 904 aaPredicted RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ADI1Q9BV57 179 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms