RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TAF1AQ15573 450 aaPredicted RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 OR4D1Q15615 310 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 PPP1R3AQ16821 1122 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 CLEC6AQ6EIG7 209 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 DSELQ8IZU8 1212 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 CARNMT1Q8N4J0 409 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 KYQ8NBH2 561 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 BHMTQ93088 406 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 TMEM169Q96HH4 297 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 ZFRQ96KR1 1074 aaKnown RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 TRPC7Q9HCX4 862 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 S100A14Q9HCY8 104 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 FNDC3AQ9Y2H6 1198 aaKnown RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 ARIH1Q9Y4X5 557 aaPredicted RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 CCDC189A1A4V9 331 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 SUOXP51687 545 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 APLP1P51693 650 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 SMAD3P84022 425 aaKnown RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 UNC50Q53HI1 259 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 FAM43BQ6ZT52 329 aaPredicted RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 KBTBD2Q8IY47 623 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 TRMT2BQ96GJ1 504 aaKnown RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 BPIFA1Q9NP55 256 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 HSFX1Q9UBD0 423 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 MED16Q9Y2X0 877 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 LRRC14BA6NHZ5 514 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 ANKRD66B4E2M5 251 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 H0Y626 953 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 TBL1XO60907 577 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 TMCC1O94876 653 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 SIX3O95343 332 aaPredicted RBP21.64■■□□□ 1.06
CLN6-201ENST00000249806 SPATA31D3P0C874 917 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 ACADSP16219 412 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 VEPH1Q14D04 833 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 SETMARQ53H47 684 aaPredicted RBP21.64■■□□□ 1.06
CLN6-201ENST00000249806 SPATA31D4Q6ZUB0 917 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 CORO1CQ9ULV4 474 aaPredicted RBP21.64■■□□□ 1.06
CLN6-201ENST00000249806 TRAF6Q9Y4K3 522 aa21.64■■□□□ 1.06
CLN6-201ENST00000249806 C2orf81A6NN90 581 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 UBXN8O00124 270 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 PPP6CO00743 305 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 SLC22A2O15244 555 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 FKBP6O75344 327 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 CCL5P13501 91 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 ADSLP30566 484 aaPredicted RBP21.64■■□□□ 1.05
CLN6-201ENST00000249806 TRAF2Q12933 501 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 PAQR3Q6TCH7 311 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 RNF111Q6ZNA4 994 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 SLC39A11Q8N1S5 342 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 PELI3Q8N2H9 469 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 EFHBQ8N7U6 833 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 PPFIBP2Q8ND30 876 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 L3HYPDHQ96EM0 354 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 MEAF6Q9HAF1 191 aa21.64■■□□□ 1.05
CLN6-201ENST00000249806 RHOBTB1O94844 696 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 PARNO95453 639 aaKnown RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 MT-CO1P00395 513 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 HERVK_113P63132 956 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 GALNT1Q10472 559 aaPredicted RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 TXNDC8Q6A555 127 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 PIANPQ8IYJ0 282 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 PTGR2Q8N8N7 351 aaPredicted RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 LPGAT1Q92604 370 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 TOP1MTQ969P6 601 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ZNF558Q96NG5 402 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 CDRT15Q96T59 188 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ERVK-6Q9BXR3 956 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ZNF334Q9HCZ1 680 aaPredicted RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 INTS10Q9NVR2 710 aaKnown RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 NDE1Q9NXR1 346 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 GALPQ9UBC7 116 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 MAP3K7O43318 606 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 SMIM24O75264 130 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 SRP72O76094 671 aaKnown RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 MTHFD2P13995 350 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 SATB1Q01826 763 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 PFKFB4Q16877 469 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 PSAPL1Q6NUJ1 521 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 CNKSR3Q6P9H4 555 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 AAGABQ6PD74 315 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ANKRD12Q6UB98 2062 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 AFTPHQ6ULP2 937 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 HERC6Q8IVU3 1022 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ARL14EPQ8N8R7 260 aaPredicted RBP21.63■■□□□ 1.05
CLN6-201ENST00000249806 ADAMTS19Q8TE59 1207 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 FKBPLQ9UIM3 349 aa21.63■■□□□ 1.05
CLN6-201ENST00000249806 ATP6AP2A0A1C7CYW4 349 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 CFLARO15519 480 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 NDUFS3O75489 264 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 ATP6AP2O75787 350 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 ENO3P13929 434 aaPredicted RBP21.62■■□□□ 1.05
CLN6-201ENST00000249806 LPOP22079 712 aaPredicted RBP21.62■■□□□ 1.05
CLN6-201ENST00000249806 MSX2P35548 267 aaPredicted RBP21.62■■□□□ 1.05
CLN6-201ENST00000249806 MNX1P50219 401 aaPredicted RBP21.62■■□□□ 1.05
CLN6-201ENST00000249806 RAB33AQ14088 237 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 ANO7Q6IWH7 933 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 CYHR1Q6ZMK1 362 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 WFDC5Q8TCV5 224 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 FAR2Q96K12 515 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 NPAS2Q99743 824 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms