RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 B3GNT6Q6ZMB0 384 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FRA10AC1Q70Z53 315 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 GLT6D1Q7Z4J2 308 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 B4GALNT2Q8NHY0 566 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 SLC29A1Q99808 456 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 TRIM15Q9C019 465 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 TARM1B6A8C7 271 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 F5H5T6 163 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FBP2O00757 339 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 MTHFD1P11586 935 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 MYBPC1Q00872 1141 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 SGO1Q5FBB7 561 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 MARVELD2Q8N4S9 558 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 IMP4Q96G21 291 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 MRPS26Q9BYN8 205 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CNOT6Q9ULM6 557 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SLC7A4O43246 635 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 S1PR4O95977 384 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 LBPP18428 481 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ADRA1AP35348 466 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DIO3P55073 304 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SH3BP2P78314 561 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 RHDQ02161 417 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 RAD51Q06609 339 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TIGD2Q4W5G0 525 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ZNF678Q5SXM1 525 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ANKS6Q68DC2 871 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 PAQR3Q6TCH7 311 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ISCA2Q86U28 154 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 CDYL2Q8N8U2 506 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ACOX2Q99424 681 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 GID8Q9NWU2 228 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TAS2R13Q9NYV9 303 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 MYRFQ9Y2G1 1151 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DHRS12A0PJE2 317 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 NPEPPSL1A6NEC2 478 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 UBFD1O14562 309 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ENPP3O14638 875 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SLC22A2O15244 555 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TFAP2AP05549 437 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 LEPRP48357 1165 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SH3BGRP55822 239 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TRIM32Q13049 653 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 MYLK3Q32MK0 819 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 UNC50Q53HI1 259 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 KDELC1Q6UW63 502 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 GPR21Q99679 349 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 SLC45A1Q9Y2W3 748 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 A0A0D9SEW6 157 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 RTN3O95197 1032 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ZNF23P17027 643 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 POLD2P49005 469 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 KCNQ1P51787 676 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 KCNA10Q16322 511 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 MORN1Q5T089 497 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TMEM207Q6UWW9 146 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DNAJC14Q6Y2X3 702 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 OFCC1Q8IZS5 231 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 FNDC5Q8NAU1 212 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DDI1Q8WTU0 396 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 CCSER2Q9H7U1 834 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 RHBDL2Q9NX52 303 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TRMT6Q9UJA5 497 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 ANGPTL3Q9Y5C1 460 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 DNAJC15Q9Y5T4 150 aa12.59□□□□□ -0.39
RAB3IP-201ENST00000247833 TLR5O60602 858 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 CDK14O94921 469 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 GUCA1CO95843 209 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 FAM163BP0C2L3 166 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 FASP25445 335 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 NR1H2P55055 460 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 DNAJB13P59910 316 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 HERVK_113P63132 956 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 ZNF33AQ06730 810 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 DUSP4Q13115 394 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 IKBKEQ14164 716 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 ZFP28Q8NHY6 868 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 FAM110BQ8TC76 370 aa12.58□□□□□ -0.4
RAB3IP-201ENST00000247833 GRIN3AQ8TCU5 1115 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms