RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ZNF33AQ06730 810 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 C6orf10Q5SRN2 563 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 HMBOX1Q6NT76 420 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 ZFP1Q6P2D0 407 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 APLFQ8IW19 511 aaPredicted RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 MARVELD2Q8N4S9 558 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 DNAJB14Q8TBM8 379 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 SPO11Q9Y5K1 396 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 CDC7O00311 574 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 VILLO15195 856 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 MTHFD1P11586 935 aaKnown RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 ZNF26P17031 533 aaPredicted RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 CAPN3P20807 821 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 STX1BP61266 288 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 XIAPP98170 497 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 CHSY3Q70JA7 882 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 LARP4Q71RC2 724 aaKnown RBP eCLIP16.83■□□□□ 0.28
SSPN-201ENST00000242729 KLHDC8BQ8IXV7 354 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 LGI2Q8N0V4 545 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 UMODL1-AS1Q8N2C9 162 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 EFHBQ8N7U6 833 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 ZFP28Q8NHY6 868 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 PTCD2Q8WV60 388 aaKnown RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 TWIST2Q8WVJ9 160 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 SLC39A13Q96H72 371 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 TEX37Q96LM6 180 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 CDK15Q96Q40 435 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 SLC30A3Q99726 388 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 TMEM79Q9BSE2 394 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 TUBB1Q9H4B7 451 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 Q9H521 79 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
SSPN-201ENST00000242729 PRDM5Q9NQX1 630 aaPredicted RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 CNOT6Q9ULM6 557 aaKnown RBP16.83■□□□□ 0.28
SSPN-201ENST00000242729 CDH23Q9H251 3354 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 MROH6A6NGR9 719 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 H3BSA7 217 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 DENRO43583 198 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 OR1I1O60431 355 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 BAIAP3O94812 1187 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 FAM58BPP0C7Q3 252 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 HGFP14210 728 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RHOQP17081 205 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RPS24P62847 133 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 CAP1Q01518 475 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 HERC3Q15034 1050 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RPS6KA2Q15349 733 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 TSNQ15631 228 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 KLHDC10Q6PID8 442 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 GLB1LQ6UWU2 654 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RSPO2Q6UXX9 243 aaPredicted RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 TICAM1Q8IUC6 712 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 ZNF683Q8IZ20 524 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 TSPAN17Q96FV3 270 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 PCDH10Q9P2E7 1040 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RNF11Q9Y3C5 154 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 PCDHGC4Q9Y5F7 938 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 C5orf42Q9H799 3197 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 TDRD15B5MCY1 1934 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 IQCF5A8MTL0 148 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 ZNF623O75123 536 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 CRCPO75575 148 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 RHOBTB1O94844 696 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 GNAO1P09471 354 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 EEF1DP29692 281 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 PLOD1Q02809 727 aaPredicted RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 NADSYN1Q6IA69 706 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 AFAP1L2Q8N4X5 818 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 ADCY4Q8NFM4 1077 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSPN-201ENST00000242729 PRICKLE1Q96MT3 831 aaPredicted RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 GPR62Q9BZJ7 368 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 MRM3Q9HC36 420 aaKnown RBP16.82■□□□□ 0.28
SSPN-201ENST00000242729 SLAMF8Q9P0V8 285 aa16.82■□□□□ 0.28
SSPN-201ENST00000242729 ARHGEF37A1IGU5 675 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 SOCS2O14508 198 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 CHRM1P11229 460 aaPredicted RBP16.81■□□□□ 0.28
SSPN-201ENST00000242729 PCSK6P29122 969 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 HERVK_113P63132 956 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 SATB1Q01826 763 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 AAK1Q2M2I8 961 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 RABL3Q5HYI8 236 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 DHFR2Q86XF0 187 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 OR4K2Q8NGD2 314 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 ERVK-6Q9BXR3 956 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 MAP10Q9P2G4 905 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 ASB1Q9Y576 335 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 NME4O00746 187 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 TRIM24O15164 1050 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
SSPN-201ENST00000242729 HSPA1AP0DMV8 641 aaKnown RBP16.81■□□□□ 0.28
SSPN-201ENST00000242729 HSPA1BP0DMV9 641 aaKnown RBP16.81■□□□□ 0.28
SSPN-201ENST00000242729 MTHFD2P13995 350 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 DUSP4Q13115 394 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 DSC3Q14574 896 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 UGT3A2Q3SY77 523 aa16.81■□□□□ 0.28
SSPN-201ENST00000242729 UGT3A1Q6NUS8 523 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms