RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 OLFM1Q99784 485 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 ELAC2Q9BQ52 826 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 KXD1Q9BQD3 176 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 HEPHQ9BQS7 1158 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 MTG2Q9H4K7 406 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 POMKQ9H5K3 350 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 SLC8A2Q9UPR5 921 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CRYL1Q9Y2S2 319 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 ACOT9Q9Y305 439 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 MTCH2Q9Y6C9 303 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 NPIPB15A6NHN6 443 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 EDF1O60869 148 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CLDN7O95471 211 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 COL6A2P12110 1019 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 BGNP21810 368 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PMLP29590 882 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 OPRD1P41143 372 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CDKN1CP49918 316 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 IRX4P78413 519 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 COL19A1Q14993 1142 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 EIF4HQ15056 248 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CCDC153Q494R4 210 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 HECTD2Q5U5R9 776 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CGB2Q6NT52 195 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 ZNF549Q6P9A3 640 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 EP400NLQ6ZTU2 488 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PIANPQ8IYJ0 282 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CENPLQ8N0S6 344 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 GRIN3AQ8TCU5 1115 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 SEC16BQ96JE7 1060 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 KLHL32Q96NJ5 620 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 INTS10Q9NVR2 710 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CORO1CQ9ULV4 474 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 VWA7Q9Y334 891 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 COL4A3Q01955 1670 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 A0A1W2PQ67 120 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 KLF11O14901 512 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 SNX3O60493 162 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 GJA4P35212 333 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 MTHFRP42898 656 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 SLC12A2P55011 1212 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 ST8SIA6P61647 398 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 PSAPL1Q6NUJ1 521 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 CRTC1Q6UUV9 634 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 USP45Q70EL2 814 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 TSPAN33Q86UF1 283 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 NUDCD3Q8IVD9 361 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 SFTPA1Q8IWL2 248 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 YAF2Q8IY57 180 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 CCDC63Q8NA47 563 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 TTC8Q8TAM2 541 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 KCTD4Q8WVF5 259 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 RPP25Q9BUL9 199 aaKnown RBP15.19■□□□□ 0.02
HDHD3-201ENST00000238379 BRD9Q9H8M2 597 aa15.19■□□□□ 0.02
HDHD3-201ENST00000238379 DNAJC6O75061 913 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 LEFTY1O75610 366 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 CTSLP07711 333 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 CDKN2DP55273 166 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 KDSRQ06136 332 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 ADGRE1Q14246 886 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 GRIN2CQ14957 1233 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 PCLAFQ15004 111 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 DBN1Q16643 649 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 TMEM151AQ8N4L1 468 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 ZNF366Q8N895 744 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 TERB1Q8NA31 727 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 KDM1BQ8NB78 822 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 CHFRQ96EP1 664 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 TSPAN17Q96FV3 270 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 GPR78Q96P69 363 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 FAM96AQ9H5X1 160 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 COPG2Q9UBF2 871 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 STARD13Q9Y3M8 1113 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 SZT2Q5T011 3432 aa15.18■□□□□ 0.02
HDHD3-201ENST00000238379 A0A087X1B8 175 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 A8MX80 341 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 GAPDHSO14556 408 aaPredicted RBP15.17■□□□□ 0.02
HDHD3-201ENST00000238379 ECI2O75521 394 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 NEFHP12036 1026 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 POU3F3P20264 500 aaPredicted RBP15.17■□□□□ 0.02
HDHD3-201ENST00000238379 ALDH3A1P30838 453 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 POLR2LP62875 67 aaKnown RBP15.17■□□□□ 0.02
HDHD3-201ENST00000238379 TIAL1Q01085 375 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDHD3-201ENST00000238379 SEMG2Q02383 582 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 DLG1Q12959 904 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 LRIT3Q3SXY7 679 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 ARSIQ5FYB1 569 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 CES4AQ5XG92 561 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 FAM45BPQ6NSW5 357 aa15.17■□□□□ 0.02
HDHD3-201ENST00000238379 BRAT1Q6PJG6 821 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms