RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 A0A0J9YYE9 177 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 CCDC160A6NGH7 325 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 ZNF839A8K0R7 811 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 CDK14O94921 469 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 ATP6V1B2P21281 511 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 SUOXP51687 545 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 OR2T34Q8NGX1 318 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 OR2T3Q8NH03 318 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 ASB2Q96Q27 587 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
LTBR-201ENST00000228918 DNAAF2Q9NVR5 837 aaKnown RBP16.27■□□□□ 0.2
LTBR-201ENST00000228918 GALNT8Q9NY28 637 aa16.27■□□□□ 0.2
LTBR-201ENST00000228918 GOT2P00505 430 aaKnown RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 ASLP04424 464 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 FGF4P08620 206 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 THPOP40225 353 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 GPR15P49685 360 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 KIF19Q2TAC6 998 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 PITRM1Q5JRX3 1037 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 PHYKPLQ8IUZ5 450 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 NUP93Q8N1F7 819 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 IGSF8Q969P0 613 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 HIC2Q96JB3 615 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 DNAJC1Q96KC8 554 aaKnown RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 CIB1Q99828 191 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 ADAM2Q99965 735 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 NOL11Q9H8H0 719 aaKnown RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 ABCD2Q9UBJ2 740 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 PTGDR2Q9Y5Y4 395 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 CENPFP49454 3210 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 NR5A2O00482 541 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 NME4O00746 187 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 COQ9O75208 318 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 SIX3O95343 332 aaPredicted RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 STAMBPO95630 424 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 ZNF37AP17032 561 aaPredicted RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 IL10RBQ08334 325 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 ILF2Q12905 390 aaKnown RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 SEMA3AQ14563 771 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 CYTH1Q15438 398 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 OR4D1Q15615 310 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 DDR2Q16832 855 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 MAP7D1Q3KQU3 841 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 KANK2Q63ZY3 851 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 MYO1HQ8N1T3 1032 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 RYBPQ8N488 228 aaPredicted RBP16.26■□□□□ 0.19
LTBR-201ENST00000228918 ANKFN1Q8N957 763 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 GPR150Q8NGU9 434 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 TWIST2Q8WVJ9 160 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 PEX13Q92968 403 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 POPDC3Q9HBV1 291 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 MID1IP1Q9NPA3 183 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 ARMC1Q9NVT9 282 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■□□□□ 8.2
LTBR-201ENST00000228918 GMIPQ9P107 970 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 MAP10Q9P2G4 905 aa16.26■□□□□ 0.19
LTBR-201ENST00000228918 LRRC14BA6NHZ5 514 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 UBXN8O00124 270 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 PPP6CO00743 305 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 AZIN1O14977 448 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 PIP5K1BO14986 540 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 CD3EAPO15446 510 aaKnown RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 TIPRLO75663 272 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GJB3O75712 270 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GLP2RO95838 553 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 MTHFD2P13995 350 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ETFBP38117 255 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GRIA3P42263 894 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 FOXA1P55317 472 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 EFEMP1Q12805 493 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 FBXL22Q6P050 247 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ERMP1Q7Z2K6 904 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ALDH16A1Q8IZ83 802 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 C2orf69Q8N8R5 385 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 CANT1Q8WVQ1 401 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 LRCH3Q96II8 777 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 TMEM79Q9BSE2 394 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GIMAP2Q9UG22 337 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ARL5AQ9Y689 179 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ARHGAP10A1A4S6 786 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 CCDC162PA2VCL2 907 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 HTRA2O43464 458 aaPredicted RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 B4GALT3O60512 393 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 FGF1P05230 155 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 ZNF23P17027 643 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 CAPN3P20807 821 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 MAGEA8P43361 318 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 NME5P56597 212 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 LPIN1Q14693 890 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 PTPRCAPQ14761 206 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms