RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ZNF549Q6P9A3 640 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 RHBDF2Q6PJF5 856 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 MACC1Q6ZN28 852 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ARHGAP36Q6ZRI8 547 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 CHPFQ8IZ52 775 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 CENPIQ92674 756 aaPredicted RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 SKA1Q96BD8 255 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DEPDC7Q96QD5 511 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 PANX1Q96RD7 426 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 KLHL25Q9H0H3 589 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 SDCBP2Q9H190 292 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ZFYVE1Q9HBF4 777 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4Q9UBX2 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ASF1AQ9Y294 204 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 TSC22D4Q9Y3Q8 395 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 RREB1Q92766 1687 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 KRT75O95678 551 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 GLUD1P00367 558 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 ZBTB48P10074 688 aaPredicted RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 GTF2E2P29084 291 aaKnown RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 TTKP33981 857 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 MAPK10P53779 464 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 BNIP2Q12982 314 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 KCNA10Q16322 511 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 AMIGO2Q86SJ2 522 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 TBATAQ96M53 351 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 ZNF232Q9UNY5 417 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 E9PAM4 449 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 NRP2O60462 931 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 NUDT14O95848 222 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 SELPP16109 830 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 EPORP19235 508 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 RPL3P39023 403 aaKnown RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 TSNQ15631 228 aaKnown RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 ANKS1BQ7Z6G8 1248 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 PYROXD2Q8N2H3 581 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 FAIM2Q9BWQ8 316 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 ADAM30Q9UKF2 790 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 DHRS12A0PJE2 317 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 FAM47E-STBD1D6RA91 191 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 MYL12BO14950 172 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 IPO13O94829 963 aaKnown RBP11.51□□□□□ -0.57
NOD1-201ENST00000222823 CCNCP24863 283 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 MPSTP25325 297 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 FSTL1Q12841 308 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 KLF10Q13118 480 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 GATAD2AQ86YP4 633 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 COLGALT2Q8IYK4 626 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 SPATA22Q8NHS9 363 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
NOD1-201ENST00000222823 SYT11Q9BT88 431 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 FAM192AQ9GZU8 254 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 BRD9Q9H8M2 597 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 ARL8BQ9NVJ2 186 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
NOD1-201ENST00000222823 FAM25AB3EWG3 89 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 FAM25CB3EWG5 89 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 FAM25GB3EWG6 89 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 RFXANKO14593 260 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 NDUFB5O43674 189 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 RPP40O75818 363 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 EIF2S1P05198 315 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 CREB1P16220 341 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 CORO1AP31146 461 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 CHN2P52757 468 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 TCEA2Q15560 299 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 DLG2Q15700 870 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 CCDC92Q53HC0 331 aaPredicted RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 FAM46CQ5VWP2 391 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ZC3H7AQ8IWR0 971 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 ZNF567Q8N184 647 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 GSTCDQ8NEC7 633 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ZFP28Q8NHY6 868 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 CXorf40BQ96DE9 158 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 MYO19Q96H55 970 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 FAXDC2Q96IV6 333 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SNX27Q96L92 541 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 OR52E6Q96RD3 313 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 OSBPL6Q9BZF3 934 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 C12orf65Q9H3J6 166 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ELFN1P0C7U0 828 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 UMPSP11172 480 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 IGFBP4P22692 258 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms