RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 OR6F1Q8NGZ6 308 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-201ENST00000220429 NRBF2Q96F24 287 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 NXF3Q9H4D5 531 aaKnown RBP13.64□□□□□ -0.23
GABPB1-201ENST00000220429 TCRBV7S3A2A0A539 114 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ACOT8O14734 319 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 CFLARO15519 480 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 HCRTO43612 131 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 F2P00734 622 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 BPGMP07738 259 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
GABPB1-201ENST00000220429 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 MSS51Q4VC12 460 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ARCQ7LC44 396 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 PCGF5Q86SE9 256 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 FAM71DQ8N9W8 422 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 FBXO36Q8NEA4 188 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.232e-9■□□□□ 9.6
GABPB1-201ENST00000220429 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ADNPQ9H2P0 1102 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
GABPB1-201ENST00000220429 A0A0X1KG70 313 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 LYPLA1O75608 230 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ILF2Q12905 390 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 DPYSL3Q14195 570 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PAGE2BQ5JRK9 111 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 FNBP1LQ5T0N5 605 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 NOTUMQ6P988 496 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CHST15Q7LFX5 561 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SLCO6A1Q86UG4 719 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PAF1Q8N7H5 531 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 LHFPL5Q8TAF8 219 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SPATA18Q8TC71 538 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SH3KBP1Q96B97 665 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 TOE1Q96GM8 510 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 LIN7BQ9HAP6 207 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 MAT2BQ9NZL9 334 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ISPDA4D126 451 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 MBLAC1A4D2B0 266 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SOCS2O14508 198 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PRPSAP2O60256 369 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 RECQL4O94761 1208 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 TMEM63AO94886 807 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CKMT2P17540 419 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 EVI2BP34910 448 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 RHAGQ02094 409 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 BST2Q10589 180 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 NAB1Q13506 487 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 AQP6Q13520 282 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CCNJQ5T5M9 372 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CCDC103Q8IW40 242 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 BEST2Q8NFU1 509 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SLC44A1Q8WWI5 657 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ASIC4Q96FT7 647 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 LENG8Q96PV6 779 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 WDR83Q9BRX9 315 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 MCMBPQ9BTE3 642 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 GON7Q9BXV9 100 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PLSCR3Q9NRY6 295 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 NRCAMQ92823 1304 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SLC15A5A6NIM6 579 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 DPYSL4O14531 572 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 BET1O15155 118 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PAPSS1O43252 624 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ZBTB14O43829 449 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 JUNBP17275 347 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 AKAP5P24588 427 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SERPINB5P36952 375 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 POLR2IP36954 125 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 BNIP2Q12982 314 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 NOMO1Q15155 1222 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SOWAHAQ2M3V2 549 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 GTF2IRD2BQ6EKJ0 949 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ABRAXAS1Q6UWZ7 409 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 GTF2IRD2Q86UP8 949 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 GATAD2AQ86YP4 633 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PNPT1Q8TCS8 783 aaKnown RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ADI1Q9BV57 179 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms