RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 Q96MT0 163 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 MBOAT7Q96N66 472 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 BCL2L14Q9BZR8 327 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 GRIP2Q9C0E4 1043 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 RAB21Q9UL25 225 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 SLC28A2O43868 658 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ALPPL2P10696 532 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CDH3P22223 829 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 GNA12Q03113 381 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 FAM84AQ96KN4 292 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CPXM1Q96SM3 734 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 CD248Q9HCU0 757 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 MYRFQ9Y2G1 1151 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 COL3A1P02461 1466 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 AP5Z1O43299 807 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 LRATO95237 230 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 TFPIP10646 304 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 NEDD8Q15843 81 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 PEG10Q86TG7 708 aaKnown RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 BHLHE22Q8NFJ8 381 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 SH3GL2Q99962 352 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 SEMA6AQ9H2E6 1030 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 DPEP2Q9H4A9 486 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 DHX33Q9H6R0 707 aaKnown RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ECDO95905 644 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-201ENST00000219334 MMP8P22894 467 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ITPKAP23677 461 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 HEPHQ9BQS7 1158 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 MCMBPQ9BTE3 642 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 C1orf50Q9BV19 199 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 ACSS3Q9H6R3 686 aa18.94■□□□□ 0.62
SMPD3-201ENST00000219334 RHBDF2Q6PJF5 856 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 LPCAT2Q7L5N7 544 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 XYLT1Q86Y38 959 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 C8orf59Q8N0T1 100 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 RHOJQ9H4E5 214 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 C11orf49Q9H6J7 331 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ELL3Q9HB65 397 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 NMUR1Q9HB89 426 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 DNAJC11Q9NVH1 559 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 EFCAB10A6NFE3 127 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 BANF1O75531 89 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 CYP4F2P78329 520 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 SLC20A2Q08357 652 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 PMF1Q6P1K2 205 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 LINGO4Q6UY18 593 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 RPTNQ6XPR3 784 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ANKS1BQ7Z6G8 1248 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 TMPRSS11BQ86T26 416 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 C1orf127Q8N9H9 656 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ZNF354BQ96LW1 612 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 OR52E6Q96RD3 313 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 MAGEH1Q9H213 219 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ABCG8Q9H221 673 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 TNKS2Q9H2K2 1166 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 PRDM8Q9NQV8 689 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 MFHAS1Q9Y4C4 1052 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 SOWAHBA6NEL2 793 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 LINC00032P0C843 101 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 UGT2B15P54855 530 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 MRPS22P82650 360 aaKnown RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 LGALS3BPQ08380 585 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 NDUFAF6Q330K2 333 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 CERCAMQ5T4B2 595 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 PLD4Q96BZ4 506 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 FAM124BQ9H5Z6 455 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 CLN6Q9NWW5 311 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ZFP37Q9Y6Q3 630 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 H7C0S8 307 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 GPD2P43304 727 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 CACNG1Q06432 222 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 KIAA0408Q6ZU52 694 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 CAMK1DQ8IU85 385 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 ADAMTS15Q8TE58 950 aa18.93■□□□□ 0.62
SMPD3-201ENST00000219334 PTCD3Q96EY7 689 aaKnown RBP18.93■□□□□ 0.62
SMPD3-201ENST00000219334 PNMA8CA0A1B0GUJ8 204 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 GPR25O00155 361 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 PEX10O60683 326 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 MBTD1Q05BQ5 628 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 TNK2Q07912 1038 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 ZBTB2Q8N680 514 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 SPAG4Q9NPE6 437 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 FAM237BA0A1B0GVD1 139 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 H3BQF6 201 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 OR10H3O60404 316 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 TOP3BO95985 862 aaKnown RBP18.92■□□□□ 0.62
SMPD3-201ENST00000219334 HNRNPLP14866 589 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMPD3-201ENST00000219334 IDO1P14902 403 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 SLC6A2P23975 617 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 GRIA3P42263 894 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 PSME3P61289 254 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 CRHR2Q13324 411 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-201ENST00000219334 OR4A15Q8NGL6 344 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 ART4Q93070 314 aa18.92■□□□□ 0.62
SMPD3-201ENST00000219334 HNRNPABQ99729 332 aaKnown RBP18.92■□□□□ 0.62
SMPD3-201ENST00000219334 WRAP53Q9BUR4 548 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms