RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ZNF711Q9Y462 761 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 NEMP2A6NFY4 417 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 PIGNO95427 931 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 CTPS1P17812 591 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 MPSTP25325 297 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 HLA-FP30511 346 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 HNRNPH1P31943 449 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 MC4RP32245 332 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 CTSOP43234 321 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 NTHL1P78549 312 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 PEX6Q13608 980 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 METTL3Q86U44 580 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 CCDC106Q9BWC9 280 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 POPDC3Q9HBV1 291 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 APOBEC2Q9Y235 224 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 PDE4DIPQ5VU43 2346 aa17.21■□□□□ 0.35
RABGGTA-201ENST00000216840 UBA6A0AVT1 1052 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 H7C0S8 307 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 HTRA2O43464 458 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 NDUFS3O75489 264 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 PENKP01210 267 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 HNRNPA1P09651 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 TFEBP19484 476 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 CALB2P22676 271 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 GKP32189 559 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 MAPK8P45983 427 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 BCL2L1Q07817 233 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 PRSS36Q5K4E3 855 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 ASTLQ6HA08 431 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 PSAPL1Q6NUJ1 521 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 EPGNQ6UW88 154 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 PARP9Q8IXQ6 854 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 PIANPQ8IYJ0 282 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 EID2BQ96D98 161 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 RAB3IPQ96QF0 476 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 TNKS2Q9H2K2 1166 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 POMKQ9H5K3 350 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 COG4Q9H9E3 785 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 IL17CQ9P0M4 197 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 STK38LQ9Y2H1 464 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 CXorf51AA0A1B0GTR3 108 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 NPHS1O60500 1241 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 XYLBO75191 536 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 IGSF6O95976 241 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 ALPIP09923 528 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 SRCP12931 536 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 BMP1P13497 986 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 KCNA5P22460 613 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 FMO4P31512 558 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 STK19P49842 368 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 RPL26P61254 145 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 FUT11Q495W5 492 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 LYSMD3Q7Z3D4 306 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 ISCA2Q86U28 154 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 CCNYL1Q8N7R7 359 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 LEMD2Q8NC56 503 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 RPL10LQ96L21 214 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 RPL26L1Q9UNX3 145 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 MED16Q9Y2X0 877 aa17.2■□□□□ 0.34
RABGGTA-201ENST00000216840 A8MT66 165 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 DIAPH2O60879 1101 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 RB1P06400 928 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ESRRAP11474 423 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 CD1DP15813 335 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZNF37AP17032 561 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 RPL14P50914 215 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 XIAPP98170 497 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 PRKAA1Q13131 559 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 UBAP2LQ14157 1087 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZNF77Q15935 545 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 CFAP157Q5JU67 520 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 TRIM67Q6ZTA4 783 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 MAPK15Q8TD08 544 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 CCDC126Q96EE4 140 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 GPR63Q9BZJ6 419 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ALG9Q9H6U8 611 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZDHHC2Q9UIJ5 367 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 SORCS3Q9UPU3 1222 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 NEDD8-MDP1E9PL57 170 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 MATN2O00339 956 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZBTB14O43829 449 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 SOCS5O75159 536 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 SRP72O76094 671 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 HMGCLP35914 325 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 KCNC1P48547 511 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 SETMARQ53H47 684 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZRANB3Q5FWF4 1079 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 ZNF697Q5TEC3 545 aa17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 GRASPQ7Z6J2 395 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-201ENST00000216840 OR2AP1Q8NGE2 309 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms