RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PLEKHA6Q9Y2H5 1048 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 MYMKA6NI61 221 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 DUXAA6NLW8 204 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 RPL10P27635 214 aaKnown RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 RORAP35398 523 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 CCNFP41002 786 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 GRIA2P42262 883 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 BACE1P56817 501 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 DYNLL1P63167 89 aaKnown RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 PYDC2Q56P42 97 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 GPR180Q86V85 440 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 CDYL2Q8N8U2 506 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 TCP10LQ8TDR4 215 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 PGAP3Q96FM1 320 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 MTG1Q9BT17 334 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 MTMR10Q9NXD2 777 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 GHRLQ9UBU3 117 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 CNTNAP2Q9UHC6 1331 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SCN5AQ14524 2016 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 CCNHP51946 323 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SLC7A2P52569 658 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 HEPACAMQ14CZ8 416 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SULT1C3Q6IMI6 304 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SYT12Q8IV01 421 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 MCOLN2Q8IZK6 566 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 RANBP3Q9H6Z4 567 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 NCANO14594 1321 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM131LA2VDJ0 1609 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 CLRN2A0PK11 232 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 TEX33O43247 280 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SPP2Q13103 211 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 ATP1A4Q13733 1029 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SPOCD1Q6ZMY3 1216 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 LRRC52Q8N7C0 313 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 MCFD2Q8NI22 146 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 SELENOMQ8WWX9 145 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 RHOJQ9H4E5 214 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
VPS13D-201ENST00000011700 AP1M2Q9Y6Q5 423 aa6.08□□□□□ -1.44
VPS13D-201ENST00000011700 ISPDA4D126 451 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 FAM172BPA6NC97 362 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 HNF4AP41235 474 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SLC6A3Q01959 620 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SGO1Q5FBB7 561 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF470Q6ECI4 717 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ADNP2Q6IQ32 1131 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF621Q6ZSS3 439 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 DNAJB14Q8TBM8 379 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 KLHL32Q96NJ5 620 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 BCL7BQ9BQE9 202 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SLC6A15Q9H2J7 730 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 TTYH1Q9H313 450 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 RMI1Q9H9A7 625 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ANKRA2Q9H9E1 313 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 PCDHB5Q9Y5E4 795 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 MYO5AQ9Y4I1 1855 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ACKR2O00590 384 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 EIF1AYO14602 144 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 CXCL11O14625 94 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ATP5C1P36542 298 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 EIF1AXP47813 144 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 PKNOX1P55347 436 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 RPS6P62753 249 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SMTNL2Q2TAL5 461 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 RBM48Q5RL73 367 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 PGAM4Q8N0Y7 254 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SDR16C5Q8N3Y7 309 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 KIF2BQ8N4N8 673 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 PIK3R5Q8WYR1 880 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SLC22A18Q96BI1 424 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 TCEAL7Q9BRU2 100 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 SLC6A16Q9GZN6 736 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF304Q9HCX3 659 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 COPS7AQ9UBW8 275 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ABCC6O95255 1503 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 CYB561D2O14569 222 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ATG13O75143 517 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ALDH2P05091 517 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ATP5A1P25705 553 aaKnown RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 TCF7P36402 384 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 GMPSP49915 693 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 STXBP5Q5T5C0 1151 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 CRTC3Q6UUV7 619 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 DENND5BQ6ZUT9 1274 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 COLGALT1Q8NBJ5 622 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ZSCAN18Q8TBC5 510 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 FBXO25Q8TCJ0 367 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 C7orf26Q96N11 449 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 THAP2Q9H0W7 228 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 DHRS7Q9Y394 339 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 LYPLA1O75608 230 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-201ENST00000011700 TESCQ96BS2 214 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ATXN3LQ9H3M9 355 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 ATP13A1Q9HD20 1204 aa6.07□□□□□ -1.44
VPS13D-201ENST00000011700 RBM22Q9NW64 420 aaKnown RBP eCLIP6.07□□□□□ -1.442e-7■■■■□ 24.2
VPS13D-201ENST00000011700 SAMHD1Q9Y3Z3 626 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms