RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 RAB39AQ14964 217 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 OR4D1Q15615 310 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 TBPL2Q6SJ96 375 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 ZNF554Q86TJ5 538 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 ZNF354CQ86Y25 554 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 CILP2Q8IUL8 1156 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 KLHDC8BQ8IXV7 354 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 GPC2Q8N158 579 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 CASP10Q92851 521 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 PABPC5Q96DU9 382 aaKnown RBP14.03□□□□□ -0.16
USH1C-201ENST00000005226 CCDC126Q96EE4 140 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 BIRC8Q96P09 236 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 FADS3Q9Y5Q0 445 aa14.03□□□□□ -0.16
USH1C-201ENST00000005226 RALGAPA2Q2PPJ7 1873 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 H3BMQ9 156 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 DNAJB2P25686 324 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 SLC10A7Q0GE19 358 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 BNIP3Q12983 259 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 PPIL2Q13356 520 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 SLC36A3Q495N2 470 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 TIGD5Q53EQ6 642 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.16
USH1C-201ENST00000005226 OGFOD2Q6N063 350 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 KDELC1Q6UW63 502 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 CLYBLQ8N0X4 340 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 NAT16Q8N8M0 369 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 KLHL23Q8NBE8 558 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 NLGN2Q8NFZ4 835 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 THAP11Q96EK4 314 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 TBATAQ96M53 351 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 COG8Q96MW5 612 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 RTP3Q9BQQ7 232 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 RPF2Q9H7B2 306 aaKnown RBP14.02□□□□□ -0.16
USH1C-201ENST00000005226 POLR3BQ9NW08 1133 aaPredicted RBP14.02□□□□□ -0.16
USH1C-201ENST00000005226 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.16
USH1C-201ENST00000005226 NDUFAF1Q9Y375 327 aa14.02□□□□□ -0.16
USH1C-201ENST00000005226 ZFC3H1O60293 1989 aaKnown RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 ATP6V1G1O75348 118 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 BAIAP3O94812 1187 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 PSMA4P25789 261 aaKnown RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 POLR2IP36954 125 aaKnown RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 BRCC3P46736 316 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 SERPINH1P50454 418 aaKnown RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 CLCN5P51795 746 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 NUP107P57740 925 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 BEX3Q00994 111 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 ARTNQ5T4W7 220 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 ACBD5Q5T8D3 534 aaPredicted RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 ZNF549Q6P9A3 640 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 DCBLD1Q8N8Z6 715 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 ESAMQ96AP7 390 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 LRRC58Q96CX6 371 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 SMARCD1Q96GM5 515 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 FAM210AQ96ND0 272 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 SEMA4BQ9NPR2 832 aaPredicted RBP14.02□□□□□ -0.17
USH1C-201ENST00000005226 RGS18Q9NS28 235 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
USH1C-201ENST00000005226 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 HAPLN1P10915 354 aaPredicted RBP14.01□□□□□ -0.17
USH1C-201ENST00000005226 TPP2P29144 1249 aaPredicted RBP14.01□□□□□ -0.17
USH1C-201ENST00000005226 ACADVLP49748 655 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 CCT8P50990 548 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 INPP5AQ14642 412 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 PYCR3Q53H96 274 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 OTUD3Q5T2D3 398 aaPredicted RBP14.01□□□□□ -0.17
USH1C-201ENST00000005226 Q6ZNX1 250 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 KCTD8Q6ZWB6 473 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 SLC22A9Q8IVM8 553 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 MIER2Q8N344 545 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 MFSD2AQ8NA29 543 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 MAGED1Q9Y5V3 778 aaPredicted RBP14.01□□□□□ -0.17
USH1C-201ENST00000005226 TANC1Q9C0D5 1861 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 J3QRK9 145 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 AZIN1O14977 448 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 CCR1P32246 355 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 SCNN1GP51170 649 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 HERVK_113P63132 956 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 PLIN5Q00G26 463 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 TIAL1Q01085 375 aaKnown RBP eCLIP14.01□□□□□ -0.17
USH1C-201ENST00000005226 SEMA3AQ14563 771 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 ATP6AP1Q15904 470 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 PAGE3Q5JUK9 113 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 HACD2Q6Y1H2 254 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 SMYD1Q8NB12 490 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 SGCDQ92629 289 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 ROPN1LQ96C74 230 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 FBXL8Q96CD0 374 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 ERVK-6Q9BXR3 956 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 NOL6Q9H6R4 1146 aaKnown RBP14.01□□□□□ -0.17
USH1C-201ENST00000005226 LTB4R2Q9NPC1 389 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms