RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Nkx1-1G3UXB3 402 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pik3cdO35904 1043 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 CremP27699 357 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Defa17Q64016 82 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 IlkapQ8R0F6 392 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Khdc3Q9CWU5 440 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cep97Q9CZ62 856 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Aqp5Q9WTY4 265 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm13212B1ASQ7 799 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 CrnnD3YUU6 520 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vps45P97390 570 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zdhhc18Q5Y5T2 380 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Itih2Q61703 946 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sytl5Q80T23 753 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Znf473Q8BI67 892 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Atp6v1g3Q8BMC1 118 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mbtps2Q8CHX6 515 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dyrk1bQ9Z188 629 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm3752A6NAT4 150 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gabrr2P56476 465 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Stmnd1Q6P3A1 279 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vtcn1Q7TSP5 283 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tbx10Q810F8 385 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dlgap2Q8BJ42 1059 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 GmppbQ8BTZ7 360 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr693Q8VF89 316 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cyp3a44Q9EQW4 504 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vnn3Q9QZ25 500 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cntn3Q07409 1028 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nek10Q3UGM2 1111 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zbtb2Q3V3W4 514 aaKnown RBP15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Lca5lQ8C0X0 741 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ogfod2Q9CQ04 349 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 HaghlQ9DB32 283 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 St14P56677 855 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 AxlQ00993 888 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 RbfaQ6P3B9 350 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PapolgQ6PCL9 739 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pnma8aQ80VM8 430 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slfn5Q8CBA2 884 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Eif2b2Q99LD9 351 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nkd1Q99MH6 471 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Katnbl1Q9CWJ3 299 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tssc4Q9JHE7 317 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mpp2Q9WV34 552 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tle2Q9WVB2 767 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr1049A2ARZ0 308 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Axin1O35625 863 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Q3TYS2 187 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zic5Q7TQ40 622 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ubap2lQ80X50 1107 aaKnown RBP15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hmgxb4Q80Y32 594 aaKnown RBP15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slc45a1Q8BIV7 751 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pcdh20Q8BIZ0 952 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Chst15Q91XQ5 561 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Det1Q9D0A0 550 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Coro1cQ9WUM4 474 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Arih2Q9Z1K6 492 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Kctd14A0A0U1RNG7 287 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm10717D3Z1I8 228 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Lrrc10bG3XA50 292 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Flt3Q00342 1000 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm5800Q497L3 186 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Coq8aQ60936 645 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fnip2Q80TD3 1108 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nae1Q8VBW6 534 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dusp21Q9D9D8 189 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hipk3Q9ERH7 1192 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fzd9Q9R216 592 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 ApipQ9WVQ5 241 aa15.54■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mkrn2osD3Z393 217 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 P01740 135 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hk1P17710 974 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Plk2P53351 682 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Anxa4P97429 319 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sh3bp2Q06649 559 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cyp2j13Q3UNV4 503 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 CcncQ62447 283 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cpa4Q6P8K8 420 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fam205cQ80YD3 371 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Il36gQ8R460 164 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Smyd2Q8R5A0 433 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tomm70Q9CZW5 611 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Lsm12Q9D0R8 195 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PolhQ9JJN0 694 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Myh13B1AR69 1938 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Adgra2Q91ZV8 1336 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r3A2AMT7 306 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cyp2a22B2RXZ2 492 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 DgkdE9PUQ8 1220 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 BC024978J3QPC3 361 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PbsnO08976 174 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Resp18P47939 175 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Glp2rQ5IXF8 512 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Klra4Q60651 263 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cand1Q6ZQ38 1230 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slc39a14Q75N73 489 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ints7Q7TQK1 966 aaKnown RBP15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hus1Q8BQY8 280 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Stx16Q8BVI5 326 aa15.53■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms