RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Cdkl4Q3TZA2 342 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hspb6Q5EBG6 162 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sim1Q61045 765 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hsph1Q61699 858 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Map2k2Q63932 401 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Slitrk4Q810B8 837 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Q810S2 196 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 SgtaQ8BJU0 315 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Q8BL95 290 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Zbtb33Q8BN78 671 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 HpdlQ8K248 371 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tmem98Q91X86 226 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Lpgat1Q91YX5 370 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 KlbQ99N32 1043 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 ArhgdiaQ99PT1 204 aaKnown RBP12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 DtnaQ9D2N4 746 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rsph9Q9D9V4 276 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Nufip1Q9QXX8 484 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 SqorQ9R112 450 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 DnpepQ9Z2W0 473 aa12.12□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 A0A286YD13 301 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sppl2cA2A6C4 690 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 6330409D20RikA2AK85 162 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Actl10A2AKE7 346 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ttc30a2A2AKQ8 664 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm3460E9QAI8 215 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Smad6O35182 495 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dnase1l3O55070 310 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Pdlim1O70400 327 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 IkbkgO88522 412 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ntrk2P15209 821 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fmo3P97501 534 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gabpb1Q00420 383 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 RelaQ04207 549 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 MplQ08351 625 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Klrb1Q0ZUP1 214 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Hdgfl1Q2VPR5 283 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Spout1Q3UHX9 385 aaKnown RBP12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rnf223Q3UV31 285 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Q3UY34 256 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rcsd1Q3UZA1 412 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dhrs13Q5SS80 376 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Lcp2Q60787 533 aaKnown RBP12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ggt1Q60928 568 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Six1Q62231 284 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Znf532Q6NXK2 1036 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Atl2Q6PA06 583 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ip6k1Q6PD10 433 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Krit1Q6S5J6 736 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tdpoz4Q6YCH2 370 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Atp2c1Q80XR2 918 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 B3galnt2Q8BG28 504 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ubald2Q8BQH4 164 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cfap36Q8C6E0 343 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fam221aQ8C790 301 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Unc5aQ8K1S4 898 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Atg10Q8R1P4 215 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cd300ldQ8VCH2 221 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Olfr96Q8VFE3 313 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ttc30a1Q99J38 664 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dhrs1Q99L04 313 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Msantd3Q9CR78 275 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Bbs2Q9CWF6 721 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 RpainQ9CWY9 219 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ttc30bQ9CY00 664 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ppil6Q9D6D8 278 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Spata9Q9D9R3 252 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fundc1Q9DB70 155 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tlr4Q9QUK6 835 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Slc22a3Q9WTW5 551 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Vmn1r49Q9WUF1 310 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Pdpk1Q9Z2A0 559 aa12.11□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Lzts3A2AHG0 700 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 MipepA6H611 711 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm13119B1ARV5 481 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm14525B1AZA0 212 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm2012B1B0R1 212 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Zbed5B2RPU8 756 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Susd5G3UW60 619 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ccdc191J3QQ27 883 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Sbk3P0C5K0 361 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 GckP52792 465 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Lim2P56563 173 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rps3P62908 243 aaKnown RBP12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Dab2P98078 766 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cdk18Q04899 451 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Tex52Q3TTI8 308 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Rnf224Q3UIW8 156 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 FaxcQ3UMF9 409 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Lipo3Q3UT41 399 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Gm14819Q62478 212 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Klra3Q64329 266 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Fam149b1Q6NSV7 578 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ntrk3Q6VNS1 825 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Smg5Q6ZPY2 1017 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Olfr320Q7TRZ4 306 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Disc1Q811T9 852 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Ppp2r2cQ8BG02 447 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Pcmtd2Q8BHD8 359 aa12.1□□□□□ -0.47
Ccdc28a-202ENSMUST00000080860 Cgrrf1Q8BMJ7 332 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms