RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Lrit3W8DXL4 681 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm13723A0A1L1SUP2 315 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Arhgef37A1IGU4 676 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Srsf11E9Q6E5 511 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Top6blJ3QMY9 579 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Hnrnph1O35737 449 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyp2a4P15392 494 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CtsdP18242 410 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 S100a8P27005 89 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Meox2P32443 303 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cbr1P48758 277 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mapkapk2P49138 386 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mybl1P51960 751 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Meaf6Q2VPQ9 191 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Adgrg5Q3V3Z3 524 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Oxr1Q4KMM3 866 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Heatr9Q5QNV8 569 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccdc42Q5SV66 316 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PtprnQ60673 979 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Reep5Q60870 185 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tlr13Q6R5N8 991 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 SybuQ8BHS8 665 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 NarsQ8BP47 559 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Heatr3Q8BQM4 679 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PisdQ8BSF4 406 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Q8K2W9 541 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1414Q8VGU5 312 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Smap1Q91VZ6 440 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Serpina3nQ91WP6 418 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmco1Q921L3 188 aaKnown RBP9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Usp16Q99LG0 825 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Acbd6Q9D061 282 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 MrnipQ9D1F5 335 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Hhipl2Q9D2G9 717 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gtf2h1Q9DBA9 547 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tnfsf14Q9QYH9 239 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cldn3Q9Z0G9 219 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Btbd19S4R1I0 287 aa9.09□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Klri1B2KG20 248 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cyp2b23E9Q593 491 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rhox13F6YCR7 232 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 EsrraO08580 422 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nr3c1P06537 783 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc2a4P14142 509 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fgfr2P21803 821 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MarcksP26645 309 aaKnown RBP9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Actr2P61161 394 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rasgrf2P70392 1189 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Chrna5Q2MKA5 467 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zyg11bQ3UFS0 744 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Arhgef9Q3UTH8 516 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm5592Q3V0A6 857 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MaeaQ4VC33 396 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam83gQ5SWY7 812 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ggnbp1Q6K1E7 370 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc22a27Q76M72 551 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr452Q7TRV8 317 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Elmo2Q8BHL5 732 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 AopepQ8BXQ6 817 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc35f4Q8BZK4 485 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 ScaiQ8C8N2 606 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kcnc4Q8R1C0 628 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Papd4Q91YI6 484 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 HaghQ99KB8 309 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rrs1Q9CYH6 365 aaKnown RBP9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pik3ap1Q9EQ32 811 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ndst3Q9EQH7 873 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ccnl2Q9JJA7 518 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Srd5a3Q9WUP4 330 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ap4b1Q9WV76 738 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Racgap1Q9WVM1 628 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gdf15Q9Z0J7 303 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Igf2rQ07113 2483 aaKnown RBP9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1375A0A0N4SUP0 313 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Klhl4B1AZR0 717 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Trim12cD3Z3L3 497 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zfp758E9QAA1 583 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mmp8O70138 465 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Il2raP01590 268 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cd79bP15530 228 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 B4galt1P15535 399 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cd63P41731 238 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Psma2P49722 234 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PtpaP58389 323 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cln5Q3UMW8 341 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ubash3aQ3V3E1 624 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zc3h12aQ5D1E7 596 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Irgm1Q60766 409 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Klf2Q60843 354 aaKnown RBP9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gucy2gQ6TL19 1100 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ube2oQ6ZPJ3 1288 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tas2r131Q7M708 310 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ugt2a3Q8BWQ1 534 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zfp446Q8C9M8 523 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q8CCC3 530 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 St8sia6Q8K4T1 398 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Atp2a1Q8R429 994 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pold4Q9CWP8 107 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slx4ipQ9D7Y9 413 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kcne2Q9D808 123 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms