RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 4921511C20RikQ8BVT7 469 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Znf385bQ8BXJ8 482 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gpr20Q8BYC4 358 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Frs2Q8C180 508 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ipo13Q8K0C1 963 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mob2Q8VI63 235 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pcdhga4Q91XY4 930 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Q922R1 422 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lrrc4Q99PH1 652 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lrrc17Q9CXD9 443 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Atad1Q9D5T0 361 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Oas1eA0A0J9YV76 386 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm4756A0A140LIS8 335 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Zscan5bB2RTN3 468 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 2210016F16RikG3X8U3 338 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lamp2P17047 415 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Serac1Q3U213 654 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Eps15l1Q60902 907 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ntan1Q64311 310 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc5a9Q8VDT1 685 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Setd7Q8VHL1 366 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 March2Q99M02 246 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Bcas2Q9D287 225 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Q9D3J9 298 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rhox9Q9EQM5 227 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc28a3Q9ERH8 703 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Megf6Q80V70 1572 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Grin3aA2AIR5 1135 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fbrsl1E9Q9T0 1031 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Vmn2r65G3X931 845 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Neu1O35657 409 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Odc1P00860 461 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Adra1dP97714 562 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Spryd7Q3TFQ1 196 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gpr174Q3U507 335 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cdc14bQ6PFY9 485 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 GmppbQ8BTZ7 360 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ifi44Q8BV66 422 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Snx16Q8C080 344 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Stk32cQ8QZV4 488 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Smap1Q91VZ6 440 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pcdhga10Q91XY9 930 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mtfr1Q99MB2 328 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Spata1Q9D5R4 444 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rhobtb1Q9DAK3 695 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tor1bQ9ER41 336 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Il22bQ9JJY8 179 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Krt6bQ9Z331 562 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Vmn2r67K7N6T2 851 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Il4i1O09046 630 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc2a7P0C6A1 513 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 SpnP15702 395 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 PenkP22005 268 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Aldh2P47738 519 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 GaaP70699 953 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Q32M26 199 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Glp2rQ5IXF8 512 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ei24Q61070 340 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 AW551984Q8BGF0 804 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cnpy4Q8BQ47 245 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sec22cQ8BXT9 303 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc36a1Q8K4D3 475 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Prrg2Q8R182 198 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Wnt9aQ8R5M2 365 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr330Q8VGD9 315 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc13a3Q91Y63 600 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ppp6cQ9CQR6 305 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 PclafQ9CQX4 110 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rpl9-ps1S4R1R7 191 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Acnat1A2AKK5 416 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr1145A2AVC7 325 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cyp2w1E9Q816 493 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sbk3P0C5K0 361 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Psmd7P26516 321 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Larp7Q05CL8 570 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sppl2bQ3TD49 578 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ulk3Q3U3Q1 472 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm4981Q3ULJ8 291 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Srbd1Q497V5 1015 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 DazlQ64368 298 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Magee1Q6PCZ4 918 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tas2r131Q7M708 310 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 D3Ertd751eQ8BGN2 192 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Trmt2bQ8BQJ6 493 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Nmur2Q8BZ39 395 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 PvrQ8K094 408 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 ZwilchQ8R060 589 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Akr1c20Q8VC77 323 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Diras1Q91Z61 198 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pole4Q9CQ36 118 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Anks3Q9CZK6 655 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fbxl20Q9CZV8 436 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Hacd2Q9D3B1 254 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ccdc70Q9D9B0 223 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gpr63Q9EQQ3 425 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mmp19Q9JHI0 527 aa9.72□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc6a21A0A1B0GSD2 748 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Phf11cB4XVP9 339 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm8011K7N6Y5 207 aa9.71□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Angpt2O35608 496 aa9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms