RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Slco1a5Q91YY5 670 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Unc50Q9CQ61 259 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cdkn2aipnlQ9D211 116 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cpxm2Q9D2L5 764 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Kif12Q9D2Z8 642 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Isca2Q9DCB8 154 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vps35Q9EQH3 796 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Insl5Q9WUG6 135 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Keap1Q9Z2X8 624 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dock1Q8BUR4 1865 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ccdc194A0A140LIT1 234 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rrn3B2RS91 656 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Prrt4B2RU40 902 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm20828J3KMI7 228 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 P01668 110 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cd4P06332 457 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 St14P56677 855 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cdh9P70407 786 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 BmxP97504 651 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Fam131bQ3TY60 332 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Il15raQ60819 263 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Eps15l1Q60902 907 aaKnown RBP9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cntn2Q61330 1040 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Lrrc8eQ66JT1 795 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tlr12Q6QNU9 906 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Fndc11Q80WB0 326 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mterf2Q8BKY8 385 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Sec22cQ8BXT9 303 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gbp5Q8CFB4 590 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 CtbsQ8R242 366 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 TmlheQ91ZE0 421 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Txndc9Q9CQ79 226 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cnot11Q9CWN7 505 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Kdm8Q9CXT6 414 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tmem80Q9D3H0 123 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tor1bQ9ER41 336 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cacng3Q9JJV5 315 aa9.8□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm6133B2RY53 190 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slc4a5E9Q3M5 1116 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 GhrP16882 650 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gria2P23819 883 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cyp2a12P56593 492 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Trpv5P69744 723 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 AnpepP97449 966 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 SelpQ01102 768 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pnrc1Q3TWH3 297 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 CamkvQ3UHL1 512 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 DazlQ64368 298 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 DrgxQ8BYH0 263 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Strip2Q8C9H6 844 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slfn5Q8CBA2 884 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rdh13Q8CEE7 334 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pcdhgc3Q91XX1 934 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dhrs1Q99L04 313 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pole4Q9CQ36 118 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Trmt11Q9CWH5 460 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rsph14Q9D3W1 341 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 D7h11orf16Q9JJR6 402 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Actl7aQ9QY84 440 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Clcn5Q9WVD4 746 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Arih2Q9Z1K6 492 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vmn2r17E9PYF5 849 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vmn2r55G3UWZ4 781 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vmn2r53L7N473 806 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tpst1O70281 370 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 P01673 111 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Impdh1P50096 514 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 F8a1Q00558 380 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Flot2Q60634 428 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ei24Q61070 340 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 ChpfQ6IQX7 774 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Arl5aQ80ZU0 179 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Nup54Q8BTS4 510 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Acap1Q8K2H4 740 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Frmd4bQ920B0 1035 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rgs3Q9DC04 966 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 MkksQ9JI70 570 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Hao2Q9NYQ2 353 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Btbd19S4R1I0 287 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Myo16Q5DU14 1919 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Casp8ap2Q9WUF3 1962 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 1810010D01RikA0A1L1SR87 51 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Zmynd12A2BGJ5 363 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Eif2b3B1AUN2 452 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Nedd8P29595 81 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Eci1P42125 289 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 WasP70315 520 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slfn4Q3UV66 602 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cep295nlQ497N6 533 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Lrrc8dQ8BGR2 859 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dlgap2Q8BJ42 1059 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Epm2aip1Q8VEH5 606 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slco1c1Q9ERB5 715 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slc28a3Q9ERH8 703 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 PyglQ9ET01 850 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rgs1Q9JL25 209 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Sbf1Q6ZPE2 1867 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 LctF8VPT3 1931 aa9.79□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Kbtbd6E9PYD7 486 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms