RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PigqQ9QYT7 581 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sgk2Q9QZS5 367 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tle6Q9WVB3 581 aa8.72□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vps13aQ5H8C4 3166 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mgat4eA6H684 439 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pnldc1B2RXZ1 531 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fam151bD3YUE4 279 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 GmlE9PX31 176 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sgo2bJ3QMK1 1167 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ctla2bP12400 113 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hnf1bP27889 558 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ext2P70428 718 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmc5Q32NZ6 967 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hbq1bQ3U0A6 142 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pde1aQ61481 565 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 PtprcapQ64697 197 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ints7Q7TQK1 966 aaKnown RBP8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dhx33Q80VY9 698 aaKnown RBP8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Atp2c1Q80XR2 918 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Morc4Q8BMD7 928 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ttc34Q8C0Q3 554 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mrps33Q9D2R8 106 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cnbd2Q9D5U8 673 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Kctd4Q9D7X1 259 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 RhojQ9ER71 214 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nufip1Q9QXX8 484 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pkp3Q9QY23 797 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 CpqQ9WVJ3 470 aa8.71□□□□□ -1.01
Trim39-201ENSMUST00000042717 OtofQ9ESF1 1997 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gbp4A4UUI3 631 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm16427J3QN52 483 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cyp2j6O54750 501 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Klc2O88448 599 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ifrd1P19182 449 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ptger4P32240 513 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sipa1P46062 1037 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hspa4lP48722 838 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 ErgP81270 486 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc69Q3TCJ8 202 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Serpina3gQ5I2A0 440 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Paqr6Q6TCG5 343 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tigd3Q7TM95 470 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cplx4Q80WM3 160 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Stkld1Q80YS9 662 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ppp1r12bQ8BG95 976 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc184Q8BMK5 191 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sfr1Q8BP27 319 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Spp2Q8K1I3 203 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Acap1Q8K2H4 740 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tram1l1Q8QZR0 363 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sirt3Q8R104 334 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Acsf2Q8VCW8 615 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr722Q8VFC8 308 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 VitQ8VHI5 650 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mat1aQ91X83 396 aaKnown RBP8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Camk1Q91YS8 374 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ggt7Q99JP7 662 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mrpl57Q9CQF8 102 aaKnown RBP8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc83Q9D4V3 305 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 2010005H15RikQ9D8D6 97 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 PdiltQ9DAN1 588 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr706Q9EPF8 316 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cacna1dQ99246 2179 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Znf536Q8K083 1302 aa8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 MylkQ6PDN3 1941 aaKnown RBP8.71□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nup210Q9QY81 1886 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tnfrsf14A0A1W2P7D5 276 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Armc4B2RY50 1037 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Catsperg2C6KI89 1145 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rap1gds1E9Q912 607 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 P01673 111 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Atp5bP56480 529 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fbp2P70695 339 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dusp2Q05922 318 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ankrd34bQ3UUF8 508 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam91a1Q3UVG3 837 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Akr1clQ3UXL1 322 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Arhgef15Q5FWH6 849 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 StyxQ60969 223 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Npdc1Q64322 332 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hs3st2Q673U1 367 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ssxb3Q6XAS4 170 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hfe2Q7TQ32 420 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfyve1Q810J8 777 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Slc17a6Q8BLE7 582 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fbxo48Q8CAT8 161 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fnbp1lQ8K012 605 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Znf426Q8R1D1 550 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nudcd3Q8R1N4 363 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Camkk1Q8VBY2 505 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr1325Q8VF43 315 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mfsd5Q921Y4 450 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfp655Q9CZP3 541 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Q9D5Y0 588 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 MrgbpQ9DAT2 204 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tm9sf1Q9DBU0 606 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dbn1Q9QXS6 706 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Actl7aQ9QY84 440 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ppm1dQ9QZ67 598 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ruvbl2Q9WTM5 463 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms