RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Serpinb1bQ8VHP7 382 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hes2O54792 157 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ahsa2Q8N9S3 331 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ssu72Q9CY97 194 aaKnown RBP16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 CabyrQ9D424 453 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Akr1c12Q9JLI0 323 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pdha2P35487 391 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pdcd5P56812 126 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Smpdl3bP58242 456 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mgat3Q10470 538 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PmlQ60953 885 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cgrrf1Q8BMJ7 332 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HlfQ8BW74 295 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fam46bQ8C152 427 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mterf3Q8R3J4 412 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zfp709Q8VC29 727 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mrgpra2Q91WW4 305 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Yipf2Q99LP8 312 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Htra2Q9JIY5 458 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ripk3Q9QZL0 486 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pramef17A2ASJ1 475 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vmn2r51L7N215 852 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Bmp1P98063 991 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sytl5Q80T23 753 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 NanogQ80Z64 305 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 VcpkmtQ8C436 228 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pacs1Q8K212 961 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dcaf8Q8N7N5 591 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pqbp1Q91VJ5 263 aaKnown RBP16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Grm3Q9QYS2 879 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gpc6Q9R087 555 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cyp2b19O55071 492 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cd4P06332 457 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ppm1jQ149T7 507 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr325Q5NCD2 326 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Memo1Q91VH6 297 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc44a3Q921V7 656 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 DhddsQ99KU1 333 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mbd3l1Q9D9H3 186 aa16.59■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zfp945E9PYM8 794 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Clcn7O70496 803 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc43a1Q8BSM7 564 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tinf2Q9QXG9 341 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 ArP19091 899 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Neurl1bQ0MW30 546 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 EnkurQ6SP97 255 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr798Q7TRH8 311 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Coq6Q8R1S0 476 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc9a8Q8R4D1 576 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 EcdQ9CS74 641 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Spesp1Q9D5A0 399 aa16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rpl38Q9JJI8 70 aaKnown RBP16.58■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slfn9B1ARD6 910 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fam71e2L7N480 754 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pak6Q3ULB5 682 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mri1Q9CQT1 369 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Prdm5Q9CXE0 599 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 IkbkeQ9R0T8 717 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Folh1O35409 752 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hcn4O70507 1186 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tmem184cQ3TPR7 525 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Trmt13Q8BYH3 481 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Akr1c13Q8VC28 323 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Q9D3J9 298 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Klrc2Q9WTJ9 238 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 4931406B18RikA2RSL7 367 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Stat5aP42230 793 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc41a1Q8BJA2 512 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Csgalnact1Q8BJQ9 530 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tmem68Q9D850 329 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tnfaip8l3Q3TBL6 204 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fbxw8Q8BIA4 598 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Wnt9aQ8R5M2 365 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 NamptQ99KQ4 491 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 D3Z070 196 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Glb1P23780 647 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pfkfb4Q6DTY7 469 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Serpina3fQ80X76 445 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zcchc4Q8BKW4 512 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mfsd5Q921Y4 450 aa16.58■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc9a6A1L3P4 702 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr1305A2AVW3 312 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc9a3G3X939 829 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm3476K7N6V0 257 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Kxd1Q80XH1 177 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Smim5Q8BT42 78 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slx1bQ8BX32 270 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ttc25Q9D4B2 624 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Prorsd1Q9D820 169 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Vnn1Q9Z0K8 512 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tuba3aP05214 450 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ap4e1Q80V94 1122 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 MtdhQ80WJ7 579 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 B3gnt7Q8K0J2 397 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Adgrf1Q8VEC3 908 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tmem114Q9D563 222 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm6205E9PZS2 359 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PklrP53657 574 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 GmpsQ3THK7 693 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tmprss11eQ5S248 423 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms