RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Vmn2r55G3UWZ4 781 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pabpc4lG5E8X2 370 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Hs3st1O35310 311 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Drd4P51436 387 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cyp2a12P56593 492 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 PrkcgP63318 697 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Caprin1Q60865 707 aaKnown RBP13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 XpaQ64267 272 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trnau1apQ80VC6 287 aaKnown RBP13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmcc2Q80W04 706 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zbtb24Q80X44 710 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fam83eQ80XS7 481 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Abraxas1Q8BPZ8 407 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sept11Q8C1B7 431 aaKnown RBP13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Nrn1lQ8C4W3 162 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 KyQ8C8H8 661 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Armcx6Q8K3A6 301 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Wnt9aQ8R5M2 365 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmbim6Q9D2C7 237 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Extl1Q9JKV7 669 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trpc4apQ9JLV2 797 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Bnip3lQ9Z2F7 218 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm3752A6NAT4 150 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vmn2r46L7N282 809 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gp5O08742 567 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trdmt1O55055 415 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Per3O70361 1113 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pou4f1P17208 421 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Aqp1Q02013 269 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Alg6Q3TAE8 507 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mocs1Q5RKZ7 636 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sez6lQ6P1D5 963 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Taf1cQ6PDZ2 836 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Plekha6Q7TQG1 1173 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trmt2bQ8BQJ6 493 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Nckap1lQ8K1X4 1134 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdhr5Q8VHF2 831 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ptbp2Q91Z31 531 aaKnown RBP13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Klhdc8bQ9D2D9 354 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rai2Q9QVY8 529 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tspan3Q9QY33 253 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm13128L7MU96 475 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dsg3O35902 993 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Emp3O35912 163 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gsta1P13745 223 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Npr1P18293 1057 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdkn2bP55271 130 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pdcd5P56812 126 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Polr3bP59470 1133 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tas2r16P59529 299 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Itga11P61622 1188 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rbp1Q00915 135 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 SobpQ0P5V2 864 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lrrc58Q3UGP9 366 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pla2g4dQ50L43 825 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fam20cQ5MJS3 579 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lcp1Q61233 627 aaKnown RBP13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Msi1Q61474 362 aaKnown RBP13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ppp1r14bQ62084 147 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Actr3bQ641P0 418 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc13a5Q67BT3 572 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lpcat4Q6NVG1 524 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gsta1Q6P8Q0 223 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cfap206Q6PE87 622 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Letm2Q7TNU7 480 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr813Q7TRH5 310 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Amigo2Q80ZD9 519 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 MtbpQ8BJS8 894 aaKnown RBP13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ppm1fQ8CGA0 452 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sept8Q8CHH9 429 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fuca1Q99LJ1 452 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sytl2Q99N50 950 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 MajinQ9D992 256 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr711Q9EPG2 314 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mpp6Q9JLB0 553 aa13.43□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zmynd12A2BGJ5 363 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Itih4A6X935 942 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pex10B1AUE5 324 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vmn2r27D3YUK6 857 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zfp358E9Q8M1 571 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Spaca6E9Q8Q8 339 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tgm2P21981 686 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Hspa8P63017 646 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Inf2Q0GNC1 1273 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Btg1-ps1Q3V0S2 161 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Btg1-ps2Q3V0X0 161 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Abcb7Q61102 752 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dnajc1Q61712 552 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lrrc8dQ8BGR2 859 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Hspa13Q8BM72 471 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmem209Q8BRG8 561 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stk-ps2Q8C0V7 499 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Q8CCC3 530 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Prrg2Q8R182 198 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pcdhb17Q91VD8 799 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rwdd4Q9CPR1 188 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pbld2Q9CXN7 288 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 PacrglQ9D3X5 248 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Thap11Q9JJD0 305 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Prrt4B2RU40 902 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms