RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 DLGAP1O14490 977 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 MMP2P08253 660 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 CTSHP09668 335 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 CHRM3P20309 590 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 ALDH3B2P48448 385 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 SLC5A3P53794 718 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 DSC2Q02487 901 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 CCL14Q16627 93 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 IMP4Q96G21 291 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 TBC1D13Q9NVG8 400 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 OSER1Q9NX31 292 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 EGFL7Q9UHF1 273 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 A0A1B0GTL3 188 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 SAC3D1A6NKF1 404 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 AKAP10O43572 662 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 SLC4A1P02730 911 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 ITGB1P05556 798 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 HPCAP84074 193 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 GRB7Q14451 532 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 KRT80Q6KB66 452 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 TIGD7Q6NT04 549 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 SLC22A9Q8IVM8 553 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 AFAP1L2Q8N4X5 818 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 RPL10LQ96L21 214 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 NSUN5Q96P11 429 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 PLEKHG4BQ96PX9 1271 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 KCNA7Q96RP8 456 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 PTPN18Q99952 460 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 GPATCH1Q9BRR8 931 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 ABCC13Q9NSE7 274 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 NYNRINQ9P2P1 1898 aaKnown RBP13.85□□□□□ -0.19
PHGDH-233ENST00000642021 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 CDK14O94921 469 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 CAPN3P20807 821 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 ACADVLP49748 655 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 MLLT6P55198 1093 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 PRAMEP78395 509 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 PIK3R6Q5UE93 754 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 PPP4R4Q6NUP7 873 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF549Q6P9A3 640 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 SPPL2CQ8IUH8 684 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 OR2T34Q8NGX1 318 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 OR2T3Q8NH03 318 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 CALML6Q8TD86 181 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 TFAP2CQ92754 450 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 PBXIP1Q96AQ6 731 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 PABPC5Q96DU9 382 aaKnown RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 GALNT8Q9NY28 637 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 MYRFQ9Y2G1 1151 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 COL4A4P53420 1690 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 NR5A2O00482 541 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 CNTN5O94779 1100 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 BMP2P12643 396 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 EMP3P54852 163 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 CAPRIN1Q14444 709 aaKnown RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 HACD2Q6Y1H2 254 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 EPHX4Q8IUS5 362 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 SCML4Q8N228 414 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 ANKFN1Q8N957 763 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 L3HYPDHQ96EM0 354 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 HMCESQ96FZ2 354 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 TBATAQ96M53 351 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 ANKRD60Q9BZ19 345 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 TUBB1Q9H4B7 451 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 RSL24D1Q9UHA3 163 aaKnown RBP13.84□□□□□ -0.19
PHGDH-233ENST00000642021 AURKCQ9UQB9 309 aa13.84□□□□□ -0.19
PHGDH-233ENST00000642021 MROH6A6NGR9 719 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 TNFRSF10BO14763 440 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 TPST1O60507 370 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 OR4Q2P0C623 313 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ODC1P11926 461 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 TPP2P29144 1249 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-233ENST00000642021 CACNB2Q08289 660 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ADRM1Q16186 407 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 KIF19Q2TAC6 998 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ALFQ53S48 1182 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 FBXO48Q5FWF7 155 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 SLC15A3Q8IY34 581 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 CLYBLQ8N0X4 340 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 CBR4Q8N4T8 237 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ARL10Q8N8L6 244 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 TSPAN17Q96FV3 270 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 RMND5BQ96G75 393 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-233ENST00000642021 HAUS8Q9BT25 410 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 AGO3Q9H9G7 860 aaKnown RBP13.83□□□□□ -0.19
PHGDH-233ENST00000642021 PNPLA3Q9NST1 481 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 ARMC1Q9NVT9 282 aa13.83□□□□□ -0.19
PHGDH-233ENST00000642021 A0A1W2PQH9 124 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms