RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DSELQ8IZU8 1212 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 PELI3Q8N2H9 469 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 PYDC1Q8WXC3 89 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 JADE3Q92613 823 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 WBP2Q969T9 261 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 L3HYPDHQ96EM0 354 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 MYCBPQ99417 103 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-211ENST00000641213 RNF38Q9H0F5 515 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 COL4A6Q14031 1691 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 ABLIM3O94929 683 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 CRTAMO95727 393 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 PENKP01210 267 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 PRSS56P0CW18 603 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 HOXB8P17481 243 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 SUOXP51687 545 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF177Q13360 481 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 RFTN1Q14699 578 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 CYTH1Q15438 398 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 TYSND1Q2T9J0 566 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 C16orf89Q6UX73 402 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 CHST9Q7L1S5 443 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 ADGRG6Q86SQ4 1221 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 SDCCAG8Q86SQ7 713 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF461Q8TAF7 563 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 SLC26A7Q8TE54 656 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 RCN3Q96D15 328 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 MYRFLQ96LU7 910 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 HIPK3Q9H422 1215 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 MEAF6Q9HAF1 191 aa17.08■□□□□ 0.32
PHGDH-211ENST00000641213 POLR3BQ9NW08 1133 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 AGO1Q9UL18 857 aaKnown RBP17.08■□□□□ 0.32
PHGDH-211ENST00000641213 A0A1B0GVM2 712 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 TCAF2A6NFQ2 919 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 TSPAN3O60637 253 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 FKTNO75072 461 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 PRLP01236 227 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 IRF1P10914 325 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 C1QTNF8P60827 252 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF678Q5SXM1 525 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 ADGRF1Q5T601 910 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 AFAP1L2Q8N4X5 818 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 MDGA1Q8NFP4 955 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-211ENST00000641213 FAM136AQ96C01 138 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF184Q99676 751 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-211ENST00000641213 AARSD1Q9BTE6 412 aaKnown RBP17.07■□□□□ 0.32
PHGDH-211ENST00000641213 POPDC3Q9HBV1 291 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 SCUBE2Q9NQ36 999 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 PRPF19Q9UMS4 504 aaKnown RBP17.07■□□□□ 0.32
PHGDH-211ENST00000641213 TBC1D30Q9Y2I9 924 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 LRCH1Q9Y2L9 728 aa17.07■□□□□ 0.32
PHGDH-211ENST00000641213 C2orf78A6NCI8 922 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 CBX4O00257 560 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 UBFD1O14562 309 aaKnown RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 LIN7AO14910 233 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF37AP17032 561 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PMLP29590 882 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 NFKB2Q00653 900 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 OR4K2Q8NGD2 314 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 KLF16Q9BXK1 252 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 TDRD1Q9BXT4 1180 aaKnown RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PPP1R12CQ9BZL4 782 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 ARIH1Q9Y4X5 557 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 ANKRD12Q6UB98 2062 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 MYCP01106 439 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 F11P03951 625 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PDHA1P08559 390 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PRMT2P55345 433 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PLD1Q13393 1074 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 UNC50Q53HI1 259 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 RNF111Q6ZNA4 994 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 GLT6D1Q7Z4J2 308 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 RYBPQ8N488 228 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-211ENST00000641213 SMIM14Q96QK8 99 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 TRMOQ9BU70 441 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 PACSIN3Q9UKS6 424 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 TRAF6Q9Y4K3 522 aa17.06■□□□□ 0.32
PHGDH-211ENST00000641213 DENND4CQ5VZ89 1909 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 SMIM24O75264 130 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 SUPT7LO94864 414 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ARSAP15289 507 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 HERVK_113P63132 956 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 DSG1Q02413 1049 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 OR4D1Q15615 310 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 DHDDSQ86SQ9 333 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 HIPK4Q8NE63 616 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 CDRT15Q96T59 188 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms