RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ATPAF2Q8N5M1 289 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 FAM71DQ8N9W8 422 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 GLIS1Q8NBF1 620 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ADCY4Q8NFM4 1077 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 DEPDC1BQ8WUY9 529 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 OSCP1Q8WVF1 389 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HTR3CQ8WXA8 447 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RSAD2Q8WXG1 361 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 IRF7Q92985 503 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RTP4Q96DX8 246 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HMCESQ96FZ2 354 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RSRC1Q96IZ7 334 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TSGA13Q96PP4 275 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM51Q9BSJ1 452 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 MAGEH1Q9H213 219 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 EPC1Q9H2F5 836 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ANKZF1Q9H8Y5 726 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 SPHK2Q9NRA0 654 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 OXSMQ9NWU1 459 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 DUS2Q9NX74 493 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 UTP6Q9NYH9 597 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PLK2Q9NYY3 685 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 EPS15L1Q9UBC2 864 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 CGGBP1Q9UFW8 167 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 COL6A3P12111 3177 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 A0A0D9SEW6 157 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 TARSL2A2RTX5 802 aaKnown RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ZSCAN5CA6NGD5 496 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ARHGAP42A6NI28 874 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 H0Y626 953 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 MBTPS2O43462 519 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 B3GALT2O43825 422 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 IFNB1P01574 187 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 RHOCP08134 193 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ZSCAN5DPP0CG00 497 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ACVRL1P37023 503 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 IFNAR2P48551 515 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 SPEM2Q0P670 501 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 CDH18Q13634 790 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PTK6Q13882 451 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PPP1R7Q15435 360 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 TRIP13Q15645 432 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 FSCBQ5H9T9 825 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 LY6G5CQ5SRR4 150 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 TRIM68Q6AZZ1 485 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PARM1Q6UWI2 310 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ARHGAP36Q6ZRI8 547 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PRUNE1Q86TP1 453 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 MFN1Q8IWA4 741 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 MFSD6LQ8IWD5 586 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 CARNMT1Q8N4J0 409 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 KCT2Q8NC54 265 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 OR7D4Q8NG98 312 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 WFDC5Q8TCV5 224 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 FGF14Q92915 247 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ARHGEF2Q92974 986 aaKnown RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ELSPBP1Q96BH3 223 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ZFYVE19Q96K21 471 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 KXD1Q9BQD3 176 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 NUDT16L1Q9BRJ7 211 aaKnown RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ERP44Q9BS26 406 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 BBS2Q9BXC9 721 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PLA2G2FQ9BZM2 168 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 PCDH9Q9HC56 1237 aa8.07□□□□□ -1.12
SCARB2-220ENST00000640076 IPO11Q9UI26 975 aaKnown RBP8.07□□□□□ -1.12
SCARB2-220ENST00000640076 F5P12259 2224 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FIGNL2A6NMB9 653 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 NEDD8-MDP1E9PL57 170 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 KCNK1O00180 336 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 RNF103O00237 685 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 MTSS1O43312 755 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ECI2O75521 394 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF189O75820 626 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 KRT14P02533 472 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CYP17A1P05093 508 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 TYRP14679 529 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ETS1P14921 441 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ARSAP15289 507 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SP100P23497 879 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCNCP24863 283 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 GUCY2DQ02846 1103 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 DUPD1Q68J44 220 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 DENND5AQ6IQ26 1287 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF783Q6ZMS7 281 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 MTSS1LQ765P7 747 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CCDC13Q8IYE1 715 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 GPR161Q8N6U8 529 aaKnown RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FIBINQ8TAL6 211 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 SEC14L1Q92503 715 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ATP2A3Q93084 1043 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 FATE1Q969F0 183 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 MVB12AQ96EY5 273 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 PNKPQ96T60 521 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 ACE2Q9BYF1 805 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCARB2-220ENST00000640076 RAB17Q9H0T7 212 aa8.06□□□□□ -1.12
SCARB2-220ENST00000640076 EBF3Q9H4W6 596 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms