RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SERPINA11Q86U17 422 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 ARID3BQ8IVW6 561 aaPredicted RBP6.53□□□□□ -1.36
RFC1-217ENST00000639695 KIF18AQ8NI77 898 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 KAT2AQ92830 837 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 FAM162AQ96A26 154 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 C1QTNF5Q9BXJ0 243 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 CDT1Q9H211 546 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 DENND2DQ9H6A0 471 aaPredicted RBP6.53□□□□□ -1.36
RFC1-217ENST00000639695 COPG2Q9UBF2 871 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 TUBE1Q9UJT0 475 aa6.53□□□□□ -1.36
RFC1-217ENST00000639695 SALL3Q9BXA9 1300 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 TRIM64A6NGJ6 449 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 TRIM64BA6NI03 449 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 HSPB2A8KAH6 182 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 SMTNL1A8MU46 457 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 IPO8O15397 1037 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 ZC3H11AO75152 810 aaKnown RBP eCLIP6.52□□□□□ -1.37
RFC1-217ENST00000639695 NEURL1O76050 574 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 ETFAP13804 333 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 SRD5A1P18405 259 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 SHMT1P34896 483 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 RARRES1P49788 294 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 CSE1LP55060 971 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 SORDQ00796 357 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 ARHGEF6Q15052 776 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 HSPB2Q16082 182 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 PAPD7Q5XG87 772 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 CLEC17AQ6ZS10 378 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 TRIM74Q86UV6 250 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 TRIM73Q86UV7 250 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 ZSCAN30Q86W11 494 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 CCDC13Q8IYE1 715 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 ADGRF4Q8IZF3 695 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 FAM98AQ8NCA5 519 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 HJURPQ8NCD3 748 aaPredicted RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 HUS1BQ8NHY5 278 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 GDAP1Q8TB36 358 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 MRPS27Q92552 414 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 REPS1Q96D71 796 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 CLMNQ96JQ2 1002 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 NUDCD1Q96RS6 583 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 GAD1Q99259 594 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 ANKRD2Q9GZV1 360 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 CWC15Q9P013 229 aaKnown RBP6.52□□□□□ -1.37
RFC1-217ENST00000639695 MTRRQ9UBK8 725 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 NDRG3Q9UGV2 375 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 PLAGL1Q9UM63 463 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 ERVK-11Q9UQG0 969 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 RAP2CQ9Y3L5 183 aa6.52□□□□□ -1.37
RFC1-217ENST00000639695 SLC22A23A1A5C7 686 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 OGG1O15527 345 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 TFPIP10646 304 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 ANXA7P20073 488 aaKnown RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 PTAFRP25105 342 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 HSF1Q00613 529 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 ZNF805Q5CZA5 627 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 TTC39AQ5SRH9 613 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 AKNAD1Q5T1N1 836 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 ISM2Q6H9L7 571 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 SLC2A7Q6PXP3 512 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 CEP57L1Q8IYX8 460 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 MCPH1Q8NEM0 835 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 CMASQ8NFW8 434 aaPredicted RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 OR14L1PQ8NHC6 308 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 PTPMT1Q8WUK0 201 aaPredicted RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 ZNF419Q96HQ0 510 aaPredicted RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 VCPIP1Q96JH7 1222 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 ZNF333Q96JL9 665 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 FNBP1Q96RU3 617 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 GPATCH1Q9BRR8 931 aaKnown RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 NAA11Q9BSU3 229 aaPredicted RBP6.51□□□□□ -1.37
RFC1-217ENST00000639695 TKTL2Q9H0I9 626 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 C2orf40Q9H1Z8 148 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 SLC28A3Q9HAS3 691 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 CPNE5Q9HCH3 593 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 GDE1Q9NZC3 331 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 SLC17A6Q9P2U8 582 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 SLC4A4Q9Y6R1 1079 aa6.51□□□□□ -1.37
RFC1-217ENST00000639695 KAT6AQ92794 2004 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 LOC102723996A0A087X1L8 192 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 TRBV5-7A0A0A0MS05 114 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 GPR75-ASB3A0A0A6YYF3 556 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 A0A1B0GVM2 712 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 SMIM22K7EJ46 135 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 RHODO00212 210 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 MMP3P08254 477 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 UNGP13051 313 aaPredicted RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 MMP9P14780 707 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 AGAP20933 346 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 PRCPP42785 496 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 CCR3P51677 355 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 TAS2R40P59535 323 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 SIM1P81133 766 aaPredicted RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 NAE1Q13564 534 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 TNIP1Q15025 636 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 PGM5Q15124 567 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms