RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 OR13C4Q8NGS5 318 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 HDAC10Q969S8 669 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 CENPTQ96BT3 561 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 SCRN2Q96FV2 425 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 MSANTD3Q96H12 275 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 GPR22Q99680 433 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 TMEM245Q9H330 911 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 PSD3Q9NYI0 1048 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 NKIRAS1Q9NYS0 192 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 THAP10Q9P2Z0 257 aaPredicted RBP15.37■□□□□ 0.05
CLN6-219ENST00000637329 FBXO5Q9UKT4 447 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 STARD13Q9Y3M8 1113 aa15.37■□□□□ 0.05
CLN6-219ENST00000637329 A0A1W2PPM1 405 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 HMX2A2RU54 273 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 SRRM3A6NNA2 597 aaPredicted RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 C2CD4DB7Z1M9 353 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 TM9SF1O15321 606 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 STX7O15400 261 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 BNIP3LO60238 219 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 RFPL1O75677 317 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 HNRNPLP14866 589 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLN6-219ENST00000637329 ZNF30P17039 623 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 SLC8A1P32418 973 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 ABL2P42684 1182 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 TNFRSF4P43489 277 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 LEPRP48357 1165 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 ARSDP51689 593 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 CLCN5P51795 746 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 GYS2P54840 703 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 BMPR2Q13873 1038 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 TYSND1Q2T9J0 566 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 ZNF805Q5CZA5 627 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 SERPINA13PQ6UXR4 307 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 TPRG1Q6ZUI0 275 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 SH2D5Q6ZV89 423 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 LYSMD3Q7Z3D4 306 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 ZC3HC1Q86WB0 502 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 ZSWIM9Q86XI8 627 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 CILP2Q8IUL8 1156 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 BANPQ8N9N5 519 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 CHST14Q8NCH0 376 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 ST13P5Q8NFI4 369 aaPredicted RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 OR4K2Q8NGD2 314 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 OR6P1Q8NGX9 317 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 GRIN3AQ8TCU5 1115 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 OR8D1Q8WZ84 308 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 CDKN2AIPNLQ96HQ2 116 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 VPS39Q96JC1 886 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 RPP25Q9BUL9 199 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 PHF7Q9BWX1 381 aaPredicted RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 CAPS2Q9BXY5 557 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 GPR63Q9BZJ6 419 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 ZFYVE1Q9HBF4 777 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 CATSPERZQ9NTU4 200 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 INTS10Q9NVR2 710 aaKnown RBP15.36■□□□□ 0.05
CLN6-219ENST00000637329 IL17CQ9P0M4 197 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 VPS9D1Q9Y2B5 631 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 KCTD3Q9Y597 815 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 TICRRQ7Z2Z1 1910 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 SCN8AQ9UQD0 1980 aa15.36■□□□□ 0.05
CLN6-219ENST00000637329 BPTFQ12830 3046 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 C1orf232A0A0U1RR37 186 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 CCDC162PA2VCL2 907 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 UPK3BL1B0FP48 263 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 UPK3BL2E5RIL1 263 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 AURKAO14965 403 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 PFDN6O15212 129 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 LEFTY1O75610 366 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 GOT2P00505 430 aaKnown RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 ALDOAP04075 364 aaKnown RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 ALPIP09923 528 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 CYP2A6P11509 494 aaPredicted RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 CHN1P15882 459 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 HNF1BP35680 557 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 SUOXP51687 545 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 PTPN5P54829 565 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 ENPP2Q13822 863 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 AARS2Q5JTZ9 985 aaKnown RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 MROH9Q5TGP6 573 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 ZDHHC20Q5W0Z9 365 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 SDCCAG8Q86SQ7 713 aaPredicted RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 DENND6AQ8IWF6 608 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 C4orf33Q8N1A6 199 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 OTUD6BQ8N6M0 293 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 OR4L1Q8NH43 312 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 PPP1R16AQ96I34 528 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 SERAC1Q96JX3 654 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 TBATAQ96M53 351 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 KLHL32Q96NJ5 620 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 TCF12Q99081 682 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 P2RY13Q9BPV8 354 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 C8orf33Q9H7E9 229 aaPredicted RBP15.35■□□□□ 0.05
CLN6-219ENST00000637329 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
CLN6-219ENST00000637329 INTS9Q9NV88 658 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms