RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 STC1P52823 247 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CDKN2DP55273 166 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 HERVK_113P63132 956 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 GALNT3Q14435 633 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 IHHQ14623 411 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 KBTBD6Q86V97 674 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TMEM126BQ8IUX1 230 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CLYBLQ8N0X4 340 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CFAP52Q8N1V2 620 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PELI3Q8N2H9 469 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ANKRD49Q8WVL7 239 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PYDC1Q8WXC3 89 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 RMDN1Q96DB5 314 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PHF21BQ96EK2 531 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TRIB3Q96RU7 358 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 LBHD1Q9BQE6 289 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 AARSD1Q9BTE6 412 aaKnown RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CWH43Q9H720 699 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 WDR41Q9HAD4 459 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ACSS2Q9NR19 701 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 SPATS2LQ9NUQ6 558 aaKnown RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 ZDHHC7Q9NXF8 308 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 AFF4Q9UHB7 1163 aaKnown RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 TRAF6Q9Y4K3 522 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 KCTD3Q9Y597 815 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ARL5AQ9Y689 179 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 A0A1B0GVM2 712 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ZNF840PA6NDX5 716 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TCAF2A6NFQ2 919 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 MUSKO15146 869 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 PEX1O43933 1283 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 SLC4A1P02730 911 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PYGLP06737 847 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ENO3P13929 434 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 SLC6A4P31645 630 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 STX1BP61266 288 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PEX6Q13608 980 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PRSS55Q6UWB4 352 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 ZNF783Q6ZMS7 281 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 GLT6D1Q7Z4J2 308 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 HERC6Q8IVU3 1022 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CATSPER1Q8NEC5 780 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 OR7D4Q8NG98 312 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 STAG3L4Q8TBR4 150 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ADGRE3Q9BY15 652 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 GSTO2Q9H4Y5 243 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TAS2R13Q9NYV9 303 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 EPS15L1Q9UBC2 864 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 HCSTQ9UBK5 93 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TMCO1Q9UM00 188 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 PSMD13Q9UNM6 376 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 OR51F1A6NGY5 319 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
CLN8-212ENST00000637083 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
CLN8-212ENST00000637083 NDUFS3O75489 264 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 FGF4P08620 206 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 ZNF37AP17032 561 aaPredicted RBP12.12□□□□□ -0.47
CLN8-212ENST00000637083 PSMA3P25788 255 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 OR1D2P34982 312 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 SCNN1BP51168 640 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 FLOT2Q14254 428 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 TCTN1Q2MV58 587 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 PIGGQ5H8A4 983 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 PPM1LQ5SGD2 360 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 TMEM198Q66K66 360 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 TMEM154Q6P9G4 183 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
CLN8-212ENST00000637083 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 SLC25A23Q9BV35 468 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 FIS1Q9Y3D6 152 aa12.12□□□□□ -0.47
CLN8-212ENST00000637083 TMEM233B4DJY2 109 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 CCL22O00626 93 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 CFLARO15519 480 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 LATS1O95835 1130 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 RAG1P15918 1043 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 LPOP22079 712 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 KCNA5P22460 613 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 CORO1AP31146 461 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 PLK1P53350 603 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 RAD51Q06609 339 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 CDC16Q13042 620 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 VEPH1Q14D04 833 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 AARS2Q5JTZ9 985 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms