RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TTC30BQ8N4P2 665 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 DNAAF3Q8N9W5 541 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 MCUQ8NE86 351 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 BLOC1S5Q8TDH9 187 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 DNASE2BQ8WZ79 361 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 SNF8Q96H20 258 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 ERP44Q9BS26 406 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 GPR63Q9BZJ6 419 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 TRIM31Q9BZY9 425 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 EBF2Q9HAK2 575 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 PIH1D1Q9NWS0 290 aaKnown RBP16.01■□□□□ 0.15
CLN6-216ENST00000636876 RAB23Q9ULC3 237 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 SMG5Q9UPR3 1016 aaKnown RBP16.01■□□□□ 0.15
CLN6-216ENST00000636876 SHOC2Q9UQ13 582 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 DMTF1Q9Y222 760 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 A0A1W2PPC4 97 aa16■□□□□ 0.15
CLN6-216ENST00000636876 AURKAO14965 403 aa16■□□□□ 0.15
CLN6-216ENST00000636876 SLC31A1O15431 190 aa16■□□□□ 0.15
CLN6-216ENST00000636876 RECQL5O94762 991 aaPredicted RBP16■□□□□ 0.15
CLN6-216ENST00000636876 C1SP09871 688 aa16■□□□□ 0.15
CLN6-216ENST00000636876 TPH1P17752 444 aa16■□□□□ 0.15
CLN6-216ENST00000636876 CD27P26842 260 aa16■□□□□ 0.15
CLN6-216ENST00000636876 NBL1P41271 181 aa16■□□□□ 0.15
CLN6-216ENST00000636876 RPL21P46778 160 aaKnown RBP16■□□□□ 0.15
CLN6-216ENST00000636876 SARNPP82979 210 aaKnown RBP16■□□□□ 0.15
CLN6-216ENST00000636876 CREB5Q02930 508 aa16■□□□□ 0.15
CLN6-216ENST00000636876 PTSQ03393 145 aa16■□□□□ 0.15
CLN6-216ENST00000636876 ACOX1Q15067 660 aa16■□□□□ 0.15
CLN6-216ENST00000636876 AGERQ15109 404 aa16■□□□□ 0.15
CLN6-216ENST00000636876 LPAL2Q16609 132 aa16■□□□□ 0.15
CLN6-216ENST00000636876 DENND2CQ68D51 928 aa16■□□□□ 0.15
CLN6-216ENST00000636876 DUPD1Q68J44 220 aa16■□□□□ 0.15
CLN6-216ENST00000636876 TMC3Q7Z5M5 1100 aa16■□□□□ 0.15
CLN6-216ENST00000636876 PCGF5Q86SE9 256 aa16■□□□□ 0.15
CLN6-216ENST00000636876 HOOK3Q86VS8 718 aa16■□□□□ 0.15
CLN6-216ENST00000636876 ORAI3Q9BRQ5 295 aa16■□□□□ 0.15
CLN6-216ENST00000636876 LRRC1Q9BTT6 524 aa16■□□□□ 0.15
CLN6-216ENST00000636876 C1QTNF7Q9BXJ2 289 aa16■□□□□ 0.15
CLN6-216ENST00000636876 SEMA4AQ9H3S1 761 aa16■□□□□ 0.15
CLN6-216ENST00000636876 ZFYVE1Q9HBF4 777 aa16■□□□□ 0.15
CLN6-216ENST00000636876 EIF2B4Q9UI10 523 aaKnown RBP16■□□□□ 0.15
CLN6-216ENST00000636876 TNRC6BQ9UPQ9 1833 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 AP3B1O00203 1094 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 WNT9AO14904 365 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 SEC31AO94979 1220 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 PAK4O96013 591 aaPredicted RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 SLC4A1P02730 911 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 HNRNPA2B1P22626 353 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 ITPKAP23677 461 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 MAOBP27338 520 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 MORF4L2Q15014 288 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 TAF1AQ15573 450 aaPredicted RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 CERCAMQ5T4B2 595 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 LRRC8BQ6P9F7 803 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 Q6ZVL8 140 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 ZNF534Q76KX8 674 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 GLT6D1Q7Z4J2 308 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 TECPR1Q7Z6L1 1165 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 RAVER1Q8IY67 606 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 RGL4Q8IZJ4 473 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 DENND6BQ8NEG7 585 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 BRSK1Q8TDC3 778 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 EID2BQ96D98 161 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 DTD2Q96FN9 168 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 LOXL4Q96JB6 756 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 RAB17Q9H0T7 212 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 XAB2Q9HCS7 855 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 SNX24Q9Y343 169 aa15.99■□□□□ 0.15
CLN6-216ENST00000636876 UTP11Q9Y3A2 253 aaKnown RBP15.99■□□□□ 0.15
CLN6-216ENST00000636876 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 SMAPO00193 183 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 NDC80O14777 642 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 RAD51BO15315 384 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 MLNP12872 115 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 AKT2P31751 481 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 HMGCLP35914 325 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 ETV3P41162 512 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 SPINT3P49223 89 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 ITGA8P53708 1063 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 SESN2P58004 480 aaPredicted RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 POU6F1Q14863 301 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 WSCD2Q2TBF2 565 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 GLE1Q53GS7 698 aaKnown RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 LAIR1Q6GTX8 287 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 HIBCHQ6NVY1 386 aaPredicted RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 RFLNAQ6ZTI6 216 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 ASCL5Q7RTU5 278 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 CAND1Q86VP6 1230 aaKnown RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 NRSN1Q8IZ57 195 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 SUMF1Q8NBK3 374 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 TP53I13Q8NBR0 393 aaPredicted RBP15.98■□□□□ 0.15
CLN6-216ENST00000636876 C1orf216Q8TAB5 229 aa15.98■□□□□ 0.15
CLN6-216ENST00000636876 NUS1Q96E22 293 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms