RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SLC25A27O95847 323 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF182P17025 639 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SLC6A2P23975 617 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CCNCP24863 283 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 NDUFV1P49821 464 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 TAF6P49848 677 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ADARB1P78563 741 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 TNK2Q07912 1038 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 BROXQ5VW32 411 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CLEC6AQ6EIG7 209 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 DENND5AQ6IQ26 1287 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 LIMS2Q7Z4I7 341 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 PTRH1Q86Y79 214 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SPATA22Q8NHS9 363 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 LRRC58Q96CX6 371 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 UBXN10Q96LJ8 280 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 MTG1Q9BT17 334 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FICDQ9BVA6 458 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 NAA50Q9GZZ1 169 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FBRSL1Q9HCM7 1045 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CMTM6Q9NX76 183 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ANAPC2Q9UJX6 822 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FZD1Q9UP38 647 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 TLL2Q9Y6L7 1015 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 RALGAPA2Q2PPJ7 1873 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF638Q14966 1978 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 TYW5A2RUC4 315 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FXYD1O00168 92 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 UBFD1O14562 309 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 LGALS2P05162 132 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FGF4P08620 206 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 OXTRP30559 389 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ETFBP38117 255 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 PLK1P53350 603 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CCNA1P78396 465 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 NFKB2Q00653 900 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SV2CQ496J9 727 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 VPS26BQ4G0F5 336 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF678Q5SXM1 525 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 EGFLAMQ63HQ2 1017 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 HFE2Q6ZVN8 426 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ZC3H7AQ8IWR0 971 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SLC15A4Q8N697 577 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 MAGEE2Q8TD90 523 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 GLOD4Q9HC38 313 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ATAD3AQ9NVI7 634 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 DDIT4Q9NX09 232 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 OR12D3Q9UGF7 316 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF639Q9UID6 485 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 FNDC1Q4ZHG4 1894 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 I6L893 689 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 TNPO2O14787 897 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 INPP4BO15327 924 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 DYNC1LI2O43237 492 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 ALBP02768 609 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 FYNP06241 537 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 WARSP23381 471 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 UGT3A2Q3SY77 523 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 CCDC92Q53HC0 331 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 RBM20Q5T481 1227 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 ALKAL1Q6UXT8 129 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 TSPAN18Q96SJ8 248 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 BDH2Q9BUT1 245 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 COLEC11Q9BWP8 271 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 WDCPQ9H6R7 721 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 TRNAU1APQ9NX07 287 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 SLC2A6Q9UGQ3 507 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 PCDHA9Q9Y5H5 950 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 EP400Q96L91 3159 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 SPTLC1O15269 473 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 ADAM23O75077 832 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 MT-CO1P00395 513 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 PGK2P07205 417 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 CAPN3P20807 821 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 EEF1B2P24534 225 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 LEPRP48357 1165 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 ILF2Q12905 390 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 RPS6KA2Q15349 733 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF618Q5T7W0 954 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 CLEC20AQ6ZU45 233 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 RPS27LQ71UM5 84 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 GALNT7Q86SF2 657 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 USP33Q8TEY7 942 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 C3orf30Q96M34 536 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 FSD1LQ9BXM9 530 aa14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 SDR39U1Q9NRG7 319 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-220ENST00000635988 TSC2P49815 1807 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TMEM247A6NEH6 219 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 LRIG2O94898 1065 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 MT-CYBP00156 380 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 MATN1P21941 496 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ADRA1AP35348 466 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TMED10P49755 219 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 DAOAP59103 153 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 HERVK_113P63132 956 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 SEPT6Q14141 434 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TRIM16LQ309B1 348 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms