RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 GPN2Q9H9Y4 310 aaPredicted RBP20.15■□□□□ 0.82
TARDBP-228ENST00000629725 TRNAU1APQ9NX07 287 aaKnown RBP20.15■□□□□ 0.82
TARDBP-228ENST00000629725 OCIAD1Q9NX40 245 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 PILRAQ9UKJ1 303 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 PLAAQ9Y263 795 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 IGHV1OR21-1A0A087WYE8 117 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 EFCAB7A8K855 629 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 A8MX80 341 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 B4E171 279 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 F8VZ95 297 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 PPM1DO15297 605 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 CYP1A1P04798 512 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 PRKAR1AP10644 381 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 RFC1P35251 1148 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 TSPAN7P41732 249 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 GNPDA1P46926 289 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 RGRP47804 291 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 CSNK1DP48730 415 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 BCL2L1Q07817 233 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 SQSTM1Q13501 440 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 PEX6Q13608 980 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 MIIPQ5JXC2 388 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 SCYL2Q6P3W7 929 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 SLC30A9Q6PML9 568 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 DPPA4Q7L190 304 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 NRSN1Q8IZ57 195 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 NAGSQ8N159 534 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 TSEN2Q8NCE0 465 aaKnown RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 SLC20A1Q8WUM9 679 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 KIAA1143Q96AT1 154 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 ECHDC3Q96DC8 303 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 ABHD17AQ96GS6 310 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 EFHD1Q9BUP0 239 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 STK33Q9BYT3 514 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 PHPT1Q9NRX4 125 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 MYO9AB2RTY4 2548 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 NOTCH2Q04721 2471 aa20.14■□□□□ 0.81
TARDBP-228ENST00000629725 SPTBN1Q01082 2364 aaKnown RBP20.14■□□□□ 0.81
TARDBP-228ENST00000629725 BLACEA4D250 179 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 FGF10O15520 208 aaPredicted RBP20.13■□□□□ 0.81
TARDBP-228ENST00000629725 DUX1O43812 170 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 PRAMEF11O60813 436 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 FUCA1P04066 466 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 CEACAM5P06731 702 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 GPD1P21695 349 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 CSF2RBP32927 897 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 CDC20Q12834 499 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 ANKS6Q68DC2 871 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 HEATR4Q86WZ0 1026 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 FAM114A1Q8IWE2 563 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 NLGN4XQ8N0W4 816 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 NLGN4YQ8NFZ3 816 aaPredicted RBP20.13■□□□□ 0.81
TARDBP-228ENST00000629725 APOBEC4Q8WW27 367 aaKnown RBP20.13■□□□□ 0.81
TARDBP-228ENST00000629725 TEFMQ96QE5 360 aaKnown RBP20.13■□□□□ 0.81
TARDBP-228ENST00000629725 TUBGCP2Q9BSJ2 902 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 ZMYND15Q9H091 742 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 LRRC19Q9H756 370 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 LRRC4CQ9HCJ2 640 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 KCNK4Q9NYG8 393 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 TMEM9Q9P0T7 183 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 KIAA1468Q9P260 1216 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 NOCTQ9UK39 431 aaKnown RBP20.13■□□□□ 0.81
TARDBP-228ENST00000629725 SUFUQ9UMX1 484 aa20.13■□□□□ 0.81
TARDBP-228ENST00000629725 PES1O00541 588 aaKnown RBP20.12■□□□□ 0.81
TARDBP-228ENST00000629725 PALMO75781 387 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 MAP4P27816 1152 aaKnown RBP20.12■□□□□ 0.81
TARDBP-228ENST00000629725 FMO1Q01740 532 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 CDR2Q01850 454 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 LACTB2Q53H82 288 aaPredicted RBP20.12■□□□□ 0.81
TARDBP-228ENST00000629725 TMEM71Q6P5X7 295 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 WDR59Q6PJI9 974 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 NUS1Q96E22 293 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 SELENOOQ9BVL4 669 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 TEX101Q9BY14 249 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 DONSONQ9NYP3 566 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 FZD10Q9ULW2 581 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 ST14Q9Y5Y6 855 aa20.12■□□□□ 0.81
TARDBP-228ENST00000629725 LOC101059948A0A1B0GTJ6 334 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 NDST2P52849 883 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 AIF1P55008 147 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 GPLD1P80108 840 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 CTBSQ01459 385 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 SEPT6Q14141 434 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 DEFB109BQ30KR1 87 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 BMPERQ8N8U9 685 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 MIB2Q96AX9 1013 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 RTP4Q96DX8 246 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 CELF6Q96J87 481 aaKnown RBP20.11■□□□□ 0.81
TARDBP-228ENST00000629725 COQ10AQ96MF6 247 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 CINPQ9BW66 212 aaPredicted RBP20.11■□□□□ 0.81
TARDBP-228ENST00000629725 FRMD8Q9BZ67 464 aaPredicted RBP20.11■□□□□ 0.81
TARDBP-228ENST00000629725 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
TARDBP-228ENST00000629725 UNC79Q9P2D8 2635 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 ICE1Q9Y2F5 2266 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 PRR19A6NJB7 356 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 TRAFD1O14545 582 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 GFPT2O94808 682 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 CHRNB2P17787 502 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 ERCC5P28715 1186 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 OAS2P29728 719 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms