RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 A0A0G2JK05 382 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 A0A1W2PPC1 479 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 TTC34A8MYJ7 566 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 SH2B2O14492 632 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 CLGNO14967 610 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 STRNO43815 780 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CEP104O60308 925 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 PRAMEF2O60811 474 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 ATG13O75143 517 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 ALDOCP09972 364 aaKnown RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 PKMP14618 531 aaKnown RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 IGFBP2P18065 325 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CD72P21854 359 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 POU1F1P28069 291 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 OAS2P29728 719 aaKnown RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 FMO4P31512 558 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 TTKP33981 857 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CPOXP36551 454 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 MTNR1AP48039 350 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 AGTR2P50052 363 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 OAZ1P54368 228 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CDH8P55286 799 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 SLC37A1P57057 533 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 KRT83P78385 493 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 PLIN5Q00G26 463 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 PTGR1Q14914 329 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CDC37Q16543 378 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 SLC18A3Q16572 532 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 NTRK2Q16620 822 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 C1orf141Q5JVX7 400 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 GJB7Q6PEY0 223 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CHST9Q7L1S5 443 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 SLC46A3Q7Z3Q1 461 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 AKAP1Q92667 903 aaKnown RBP eCLIP3.34□□□□□ -1.87
VPS8-228ENST00000628962 FCRL5Q96RD9 977 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 CLSTN3Q9BQT9 956 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 RNF26Q9BY78 433 aaPredicted RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 NUAK2Q9H093 628 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
VPS8-228ENST00000628962 OR10A4Q9H209 315 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 SFXN1Q9H9B4 322 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 GRPEL1Q9HAV7 217 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 SLC35C2Q9NQQ7 365 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 RRP7BPQ9NSQ0 103 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 MKLN1Q9UL63 735 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 FAM169AQ9Y6X4 670 aa3.34□□□□□ -1.87
VPS8-228ENST00000628962 KIF26BQ2KJY2 2108 aa3.34□□□□□ -1.88
VPS8-228ENST00000628962 UTRNP46939 3433 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 FRMD3A2A2Y4 597 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 LRRC53A6NM62 1247 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 F8W810 466 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 SNAP23O00161 211 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 UBE2CO00762 179 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ZC3H11AO75152 810 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS8-228ENST00000628962 TACC1O75410 805 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ZNF432O94892 652 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 KAT7O95251 611 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 CBX6O95503 412 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 AFPP02771 609 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 RB1P06400 928 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 GALTP07902 379 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ZNF8P17098 575 aaPredicted RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 EEF1DP29692 281 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 HOXA7P31268 230 aaPredicted RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 GJC1P36383 396 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ENTPD1P49961 510 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 MRPL12P52815 198 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 WDR5P61964 334 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 PSMC6P62333 389 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 UBXN2AP68543 259 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 SHC2P98077 582 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 EGR4Q05215 589 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 AIMP1Q12904 312 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 AIMP2Q13155 320 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 FRG1Q14331 258 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 CNGA3Q16281 694 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 GSTA3Q16772 222 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 KRT71Q3SY84 523 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 RAB41Q5JT25 222 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 GKAP1Q5VSY0 366 aaPredicted RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 NADSYN1Q6IA69 706 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 NAPEPLDQ6IQ20 393 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 MTFR2Q6P444 385 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 KYAT3Q6YP21 454 aaKnown RBP3.33□□□□□ -1.88
VPS8-228ENST00000628962 GSTA5Q7RTV2 222 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 RNF144BQ7Z419 303 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 TFAP2DQ7Z6R9 452 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 TADA2BQ86TJ2 420 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 TMEM200AQ86VY9 491 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 CREBRFQ8IUR6 639 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ARHGAP12Q8IWW6 846 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 ADGRF3Q8IZF5 1079 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 CPXM2Q8N436 756 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 POMGNT2Q8NAT1 580 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 C11orf65Q8NCR3 313 aa3.33□□□□□ -1.88
VPS8-228ENST00000628962 DNAAF1Q8NEP3 725 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms